Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AMBRA1Q9C0C7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AMBRA1Q9C0C7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AMBRA1Q9C0C7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AMBRA1Q9C0C7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
AMBRA1Q9C0C7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AMBRA1Q9C0C7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AMBRA1Q9C0C7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
AMBRA1Q9C0C7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
AMBRA1Q9C0C7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AMBRA1Q9C0C7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AMBRA1Q9C0C7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.39■□□□□ 0.37
AMBRA1Q9C0C7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AMBRA1Q9C0C7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AMBRA1Q9C0C7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.39■□□□□ 0.37
AMBRA1Q9C0C7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AMBRA1Q9C0C7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.39■□□□□ 0.37
AMBRA1Q9C0C7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AMBRA1Q9C0C7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.39■□□□□ 0.37
AMBRA1Q9C0C7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
AMBRA1Q9C0C7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.39■□□□□ 0.37
AMBRA1Q9C0C7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
AMBRA1Q9C0C7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.39■□□□□ 0.37
AMBRA1Q9C0C7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.39■□□□□ 0.37
AMBRA1Q9C0C7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.39■□□□□ 0.37
AMBRA1Q9C0C7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AMBRA1Q9C0C7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AMBRA1Q9C0C7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
AMBRA1Q9C0C7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.39■□□□□ 0.37
AMBRA1Q9C0C7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AMBRA1Q9C0C7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.39■□□□□ 0.37
AMBRA1Q9C0C7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AMBRA1Q9C0C7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AMBRA1Q9C0C7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
AMBRA1Q9C0C7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.39■□□□□ 0.37
AMBRA1Q9C0C7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.39■□□□□ 0.37
AMBRA1Q9C0C7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
AMBRA1Q9C0C7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 AC009053.2-201ENST00000563701 2365 ntBASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 AC239809.2-201ENST00000415381 517 ntBASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 AC068587.9-201ENST00000641814 219 ntBASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AMBRA1Q9C0C7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 UBE2SP1-201ENST00000450587 669 ntBASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 Z85996.1-201ENST00000494644 937 ntBASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 GNAS-203ENST00000306120 1878 ntBASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AMBRA1Q9C0C7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms