Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC136632.2-201ENST00000512891 861 ntBASIC18.74■□□□□ 0.59
COL25A1Q9BXS0 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL25A1Q9BXS0 MIR3180-4-201ENST00000582223 153 ntBASIC18.74■□□□□ 0.59
COL25A1Q9BXS0 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.74■□□□□ 0.59
COL25A1Q9BXS0 AC006557.2-201ENST00000592985 1240 ntBASIC18.74■□□□□ 0.59
COL25A1Q9BXS0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
COL25A1Q9BXS0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL25A1Q9BXS0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL25A1Q9BXS0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL25A1Q9BXS0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL25A1Q9BXS0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL25A1Q9BXS0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
COL25A1Q9BXS0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
COL25A1Q9BXS0 AC003669.1-201ENST00000334569 611 ntBASIC18.73■□□□□ 0.59
COL25A1Q9BXS0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.73■□□□□ 0.59
COL25A1Q9BXS0 VN2R19P-201ENST00000442399 1052 ntBASIC18.73■□□□□ 0.59
COL25A1Q9BXS0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.73■□□□□ 0.59
COL25A1Q9BXS0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.73■□□□□ 0.59
COL25A1Q9BXS0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.73■□□□□ 0.59
COL25A1Q9BXS0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.73■□□□□ 0.59
COL25A1Q9BXS0 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.73■□□□□ 0.59
COL25A1Q9BXS0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.73■□□□□ 0.59
COL25A1Q9BXS0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.73■□□□□ 0.59
COL25A1Q9BXS0 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL25A1Q9BXS0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.73■□□□□ 0.59
COL25A1Q9BXS0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.73■□□□□ 0.59
COL25A1Q9BXS0 AC068587.10-201ENST00000641210 219 ntBASIC18.73■□□□□ 0.59
COL25A1Q9BXS0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
COL25A1Q9BXS0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL25A1Q9BXS0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL25A1Q9BXS0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL25A1Q9BXS0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
COL25A1Q9BXS0 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL25A1Q9BXS0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL25A1Q9BXS0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL25A1Q9BXS0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.73■□□□□ 0.59
COL25A1Q9BXS0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 AC125634.1-201ENST00000438758 1403 ntBASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.72■□□□□ 0.59
COL25A1Q9BXS0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.71■□□□□ 0.59
COL25A1Q9BXS0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
COL25A1Q9BXS0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL25A1Q9BXS0 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.71■□□□□ 0.59
COL25A1Q9BXS0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
COL25A1Q9BXS0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL25A1Q9BXS0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL25A1Q9BXS0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.71■□□□□ 0.59
COL25A1Q9BXS0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL25A1Q9BXS0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL25A1Q9BXS0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.71■□□□□ 0.59
COL25A1Q9BXS0 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.71■□□□□ 0.59
COL25A1Q9BXS0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.71■□□□□ 0.59
COL25A1Q9BXS0 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC18.71■□□□□ 0.59
COL25A1Q9BXS0 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.71■□□□□ 0.59
COL25A1Q9BXS0 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC18.71■□□□□ 0.59
COL25A1Q9BXS0 KRT17P7-201ENST00000451704 1104 ntBASIC18.71■□□□□ 0.59
COL25A1Q9BXS0 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.71■□□□□ 0.59
COL25A1Q9BXS0 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.71■□□□□ 0.59
COL25A1Q9BXS0 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.71■□□□□ 0.59
COL25A1Q9BXS0 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.71■□□□□ 0.59
COL25A1Q9BXS0 MIR4751-201ENST00000578027 74 ntBASIC18.71■□□□□ 0.59
COL25A1Q9BXS0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.71■□□□□ 0.59
COL25A1Q9BXS0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL25A1Q9BXS0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
COL25A1Q9BXS0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.71■□□□□ 0.59
COL25A1Q9BXS0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.71■□□□□ 0.59
COL25A1Q9BXS0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
COL25A1Q9BXS0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.7■□□□□ 0.58
COL25A1Q9BXS0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL25A1Q9BXS0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.7■□□□□ 0.58
COL25A1Q9BXS0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL25A1Q9BXS0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.7■□□□□ 0.58
COL25A1Q9BXS0 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL25A1Q9BXS0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms