Protein–RNA interactions for Protein: Q9BUH8

BEGAIN, Brain-enriched guanylate kinase-associated protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEGAINQ9BUH8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.3■■□□□ 1
BEGAINQ9BUH8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.3■■□□□ 1
BEGAINQ9BUH8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BEGAINQ9BUH8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.3■■□□□ 1
BEGAINQ9BUH8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
BEGAINQ9BUH8 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
BEGAINQ9BUH8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BEGAINQ9BUH8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.3■■□□□ 1
BEGAINQ9BUH8 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC21.3■■□□□ 1
BEGAINQ9BUH8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.3■■□□□ 1
BEGAINQ9BUH8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.3■■□□□ 1
BEGAINQ9BUH8 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC21.3■■□□□ 1
BEGAINQ9BUH8 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BEGAINQ9BUH8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
BEGAINQ9BUH8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC21.3■■□□□ 1
BEGAINQ9BUH8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.3■■□□□ 1
BEGAINQ9BUH8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BEGAINQ9BUH8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BEGAINQ9BUH8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.3■■□□□ 1
BEGAINQ9BUH8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
BEGAINQ9BUH8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
BEGAINQ9BUH8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC21.29■■□□□ 1
BEGAINQ9BUH8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.29■■□□□ 1
BEGAINQ9BUH8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
BEGAINQ9BUH8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
BEGAINQ9BUH8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
BEGAINQ9BUH8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.29■■□□□ 1
BEGAINQ9BUH8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
BEGAINQ9BUH8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BEGAINQ9BUH8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.29■■□□□ 1
BEGAINQ9BUH8 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BEGAINQ9BUH8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BEGAINQ9BUH8 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
BEGAINQ9BUH8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC21.29■■□□□ 1
BEGAINQ9BUH8 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC21.29■■□□□ 1
BEGAINQ9BUH8 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.29■■□□□ 1
BEGAINQ9BUH8 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.29■■□□□ 1
BEGAINQ9BUH8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.29■■□□□ 1
BEGAINQ9BUH8 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC21.29■■□□□ 1
BEGAINQ9BUH8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC21.29■■□□□ 1
BEGAINQ9BUH8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC21.29■■□□□ 1
BEGAINQ9BUH8 AC009533.2-201ENST00000543664 586 ntBASIC21.29■■□□□ 1
BEGAINQ9BUH8 AC190387.1-201ENST00000551683 408 ntBASIC21.29■■□□□ 1
BEGAINQ9BUH8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC21.29■■□□□ 1
BEGAINQ9BUH8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.29■■□□□ 1
BEGAINQ9BUH8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BEGAINQ9BUH8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.29■■□□□ 1
BEGAINQ9BUH8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BEGAINQ9BUH8 RCC2P3-201ENST00000418112 1537 ntBASIC21.29■■□□□ 1
BEGAINQ9BUH8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.29■■□□□ 1
BEGAINQ9BUH8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.29■■□□□ 1
BEGAINQ9BUH8 AC112777.1-201ENST00000540175 1423 ntBASIC21.29■■□□□ 1
BEGAINQ9BUH8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BEGAINQ9BUH8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BEGAINQ9BUH8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.28■■□□□ 1
BEGAINQ9BUH8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
BEGAINQ9BUH8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
BEGAINQ9BUH8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.28■■□□□ 1
BEGAINQ9BUH8 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BEGAINQ9BUH8 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BEGAINQ9BUH8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BEGAINQ9BUH8 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BEGAINQ9BUH8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC21.28■■□□□ 1
BEGAINQ9BUH8 CENPM-204ENST00000402420 688 ntTSL 5 BASIC21.28■■□□□ 1
BEGAINQ9BUH8 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC21.28■■□□□ 1
BEGAINQ9BUH8 BCRP1-201ENST00000444246 691 ntBASIC21.28■■□□□ 1
BEGAINQ9BUH8 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC21.28■■□□□ 1
BEGAINQ9BUH8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.28■■□□□ 1
BEGAINQ9BUH8 AC064836.3-201ENST00000607928 673 ntBASIC21.28■■□□□ 1
BEGAINQ9BUH8 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.28■■□□□ 1
BEGAINQ9BUH8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.28■■□□□ 1
BEGAINQ9BUH8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC21.28■■□□□ 1
BEGAINQ9BUH8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BEGAINQ9BUH8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
BEGAINQ9BUH8 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC21.28■■□□□ 1
BEGAINQ9BUH8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.27■■□□□ 1
BEGAINQ9BUH8 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.27■■□□□ 1
BEGAINQ9BUH8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BEGAINQ9BUH8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BEGAINQ9BUH8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21.27■■□□□ 1
BEGAINQ9BUH8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
BEGAINQ9BUH8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BEGAINQ9BUH8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BEGAINQ9BUH8 AC005034.1-201ENST00000426657 489 ntBASIC21.27■■□□□ 1
BEGAINQ9BUH8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.27■■□□□ 1
BEGAINQ9BUH8 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
BEGAINQ9BUH8 TAF8-206ENST00000472818 719 ntTSL 2 BASIC21.27■■□□□ 1
BEGAINQ9BUH8 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
BEGAINQ9BUH8 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC21.27■■□□□ 1
BEGAINQ9BUH8 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC21.27■■□□□ 1
BEGAINQ9BUH8 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.27■■□□□ 1
BEGAINQ9BUH8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BEGAINQ9BUH8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BEGAINQ9BUH8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
BEGAINQ9BUH8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
BEGAINQ9BUH8 AC063926.2-201ENST00000623766 1308 ntBASIC21.27■□□□□ 0.99
BEGAINQ9BUH8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
BEGAINQ9BUH8 AP005212.1-201ENST00000581547 1997 ntBASIC21.27■□□□□ 0.99
BEGAINQ9BUH8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BEGAINQ9BUH8 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms