Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TM9SF2Q99805 CYP2D8P-201ENST00000433633 1490 ntBASIC17.24■□□□□ 0.35
TM9SF2Q99805 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TM9SF2Q99805 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TM9SF2Q99805 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TM9SF2Q99805 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TM9SF2Q99805 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF2Q99805 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF2Q99805 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF2Q99805 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TM9SF2Q99805 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.23■□□□□ 0.35
TM9SF2Q99805 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.23■□□□□ 0.35
TM9SF2Q99805 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF2Q99805 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.23■□□□□ 0.35
TM9SF2Q99805 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TM9SF2Q99805 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF2Q99805 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.23■□□□□ 0.35
TM9SF2Q99805 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.23■□□□□ 0.35
TM9SF2Q99805 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.23■□□□□ 0.35
TM9SF2Q99805 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.23■□□□□ 0.35
TM9SF2Q99805 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.23■□□□□ 0.35
TM9SF2Q99805 EGLN1P1-201ENST00000531623 762 ntBASIC17.23■□□□□ 0.35
TM9SF2Q99805 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.23■□□□□ 0.35
TM9SF2Q99805 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.23■□□□□ 0.35
TM9SF2Q99805 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.23■□□□□ 0.35
TM9SF2Q99805 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
TM9SF2Q99805 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF2Q99805 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TM9SF2Q99805 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF2Q99805 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF2Q99805 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.23■□□□□ 0.35
TM9SF2Q99805 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF2Q99805 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF2Q99805 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF2Q99805 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.23■□□□□ 0.35
TM9SF2Q99805 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF2Q99805 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TM9SF2Q99805 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TM9SF2Q99805 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.22■□□□□ 0.35
TM9SF2Q99805 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.22■□□□□ 0.35
TM9SF2Q99805 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF2Q99805 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.22■□□□□ 0.35
TM9SF2Q99805 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF2Q99805 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
TM9SF2Q99805 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF2Q99805 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF2Q99805 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF2Q99805 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF2Q99805 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF2Q99805 RCN1P1-201ENST00000400413 996 ntBASIC17.22■□□□□ 0.35
TM9SF2Q99805 MIR1224-201ENST00000408193 85 ntBASIC17.22■□□□□ 0.35
TM9SF2Q99805 Z85996.1-201ENST00000494644 937 ntBASIC17.22■□□□□ 0.35
TM9SF2Q99805 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.22■□□□□ 0.35
TM9SF2Q99805 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.22■□□□□ 0.35
TM9SF2Q99805 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.22■□□□□ 0.35
TM9SF2Q99805 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
TM9SF2Q99805 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TM9SF2Q99805 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TM9SF2Q99805 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.22■□□□□ 0.35
TM9SF2Q99805 AL031598.1-201ENST00000561511 1773 ntBASIC17.22■□□□□ 0.35
TM9SF2Q99805 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF2Q99805 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF2Q99805 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
TM9SF2Q99805 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF2Q99805 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF2Q99805 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF2Q99805 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF2Q99805 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.21■□□□□ 0.35
TM9SF2Q99805 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM9SF2Q99805 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TM9SF2Q99805 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.21■□□□□ 0.35
TM9SF2Q99805 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.21■□□□□ 0.35
TM9SF2Q99805 FP475955.4-201ENST00000623131 1990 ntBASIC17.21■□□□□ 0.35
TM9SF2Q99805 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM9SF2Q99805 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TM9SF2Q99805 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.21■□□□□ 0.35
TM9SF2Q99805 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM9SF2Q99805 TSPY14P-201ENST00000303979 915 ntBASIC17.21■□□□□ 0.35
TM9SF2Q99805 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.21■□□□□ 0.35
TM9SF2Q99805 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TM9SF2Q99805 AC091390.4-202ENST00000476426 537 ntBASIC17.21■□□□□ 0.35
TM9SF2Q99805 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.21■□□□□ 0.35
TM9SF2Q99805 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.21■□□□□ 0.35
TM9SF2Q99805 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.21■□□□□ 0.35
TM9SF2Q99805 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.21■□□□□ 0.35
TM9SF2Q99805 AC092865.7-201ENST00000641832 219 ntBASIC17.21■□□□□ 0.35
TM9SF2Q99805 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.21■□□□□ 0.35
TM9SF2Q99805 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM9SF2Q99805 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TM9SF2Q99805 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TM9SF2Q99805 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM9SF2Q99805 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TM9SF2Q99805 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TM9SF2Q99805 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
TM9SF2Q99805 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TM9SF2Q99805 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TM9SF2Q99805 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TM9SF2Q99805 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TM9SF2Q99805 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TM9SF2Q99805 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms