Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDCA3Q99618 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.29■□□□□ 0.68
CDCA3Q99618 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
CDCA3Q99618 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
CDCA3Q99618 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.29■□□□□ 0.68
CDCA3Q99618 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.29■□□□□ 0.68
CDCA3Q99618 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.29■□□□□ 0.68
CDCA3Q99618 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.29■□□□□ 0.68
CDCA3Q99618 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.29■□□□□ 0.68
CDCA3Q99618 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.29■□□□□ 0.68
CDCA3Q99618 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CDCA3Q99618 MTDHP3-201ENST00000594186 672 ntBASIC19.29■□□□□ 0.68
CDCA3Q99618 AL049840.3-201ENST00000602669 611 ntBASIC19.29■□□□□ 0.68
CDCA3Q99618 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.29■□□□□ 0.68
CDCA3Q99618 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDCA3Q99618 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDCA3Q99618 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
CDCA3Q99618 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDCA3Q99618 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CDCA3Q99618 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CDCA3Q99618 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CDCA3Q99618 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA3Q99618 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA3Q99618 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA3Q99618 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA3Q99618 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA3Q99618 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA3Q99618 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA3Q99618 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.28■□□□□ 0.68
CDCA3Q99618 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA3Q99618 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA3Q99618 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA3Q99618 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA3Q99618 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA3Q99618 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA3Q99618 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA3Q99618 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.28■□□□□ 0.68
CDCA3Q99618 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.28■□□□□ 0.68
CDCA3Q99618 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA3Q99618 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA3Q99618 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA3Q99618 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA3Q99618 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.28■□□□□ 0.68
CDCA3Q99618 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.28■□□□□ 0.68
CDCA3Q99618 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA3Q99618 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA3Q99618 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA3Q99618 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA3Q99618 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.28■□□□□ 0.68
CDCA3Q99618 AL357033.4-201ENST00000617703 1807 ntBASIC19.28■□□□□ 0.68
CDCA3Q99618 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA3Q99618 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDCA3Q99618 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDCA3Q99618 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CDCA3Q99618 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
CDCA3Q99618 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDCA3Q99618 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CDCA3Q99618 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDCA3Q99618 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CDCA3Q99618 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDCA3Q99618 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDCA3Q99618 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CDCA3Q99618 MIR940-201ENST00000401276 94 ntBASIC19.27■□□□□ 0.68
CDCA3Q99618 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.27■□□□□ 0.68
CDCA3Q99618 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.27■□□□□ 0.68
CDCA3Q99618 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.27■□□□□ 0.68
CDCA3Q99618 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
CDCA3Q99618 AC116407.3-201ENST00000623905 1129 ntBASIC19.27■□□□□ 0.68
CDCA3Q99618 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.27■□□□□ 0.68
CDCA3Q99618 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDCA3Q99618 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.27■□□□□ 0.68
CDCA3Q99618 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDCA3Q99618 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CDCA3Q99618 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDCA3Q99618 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.27■□□□□ 0.67
CDCA3Q99618 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.27■□□□□ 0.67
CDCA3Q99618 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CDCA3Q99618 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDCA3Q99618 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDCA3Q99618 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.26■□□□□ 0.67
CDCA3Q99618 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDCA3Q99618 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDCA3Q99618 AC141586.3-201ENST00000562166 1838 ntBASIC19.26■□□□□ 0.67
CDCA3Q99618 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDCA3Q99618 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDCA3Q99618 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.26■□□□□ 0.67
CDCA3Q99618 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.26■□□□□ 0.67
CDCA3Q99618 AC145285.3-201ENST00000564603 959 ntBASIC19.26■□□□□ 0.67
CDCA3Q99618 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDCA3Q99618 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.26■□□□□ 0.67
CDCA3Q99618 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDCA3Q99618 AC005336.2-201ENST00000593183 939 ntBASIC19.26■□□□□ 0.67
CDCA3Q99618 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDCA3Q99618 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDCA3Q99618 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDCA3Q99618 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDCA3Q99618 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDCA3Q99618 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.25■□□□□ 0.67
CDCA3Q99618 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.25■□□□□ 0.67
CDCA3Q99618 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms