Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 AF186996.4-201ENST00000467186 377 ntBASIC22.68■■□□□ 1.22
CRAMP1Q96RY5 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC22.68■■□□□ 1.22
CRAMP1Q96RY5 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC22.68■■□□□ 1.22
CRAMP1Q96RY5 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC22.68■■□□□ 1.22
CRAMP1Q96RY5 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC22.68■■□□□ 1.22
CRAMP1Q96RY5 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC22.68■■□□□ 1.22
CRAMP1Q96RY5 SLC25A1P1-201ENST00000528351 927 ntBASIC22.68■■□□□ 1.22
CRAMP1Q96RY5 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC22.68■■□□□ 1.22
CRAMP1Q96RY5 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
CRAMP1Q96RY5 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
CRAMP1Q96RY5 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CRAMP1Q96RY5 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC22.68■■□□□ 1.22
CRAMP1Q96RY5 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC22.68■■□□□ 1.22
CRAMP1Q96RY5 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC22.67■■□□□ 1.22
CRAMP1Q96RY5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.67■■□□□ 1.22
CRAMP1Q96RY5 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC22.67■■□□□ 1.22
CRAMP1Q96RY5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
CRAMP1Q96RY5 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CRAMP1Q96RY5 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CRAMP1Q96RY5 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CRAMP1Q96RY5 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC22.67■■□□□ 1.22
CRAMP1Q96RY5 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC22.67■■□□□ 1.22
CRAMP1Q96RY5 AC096582.2-201ENST00000510860 516 ntBASIC22.67■■□□□ 1.22
CRAMP1Q96RY5 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC22.67■■□□□ 1.22
CRAMP1Q96RY5 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC22.67■■□□□ 1.22
CRAMP1Q96RY5 IRF8-202ENST00000562492 946 ntTSL 3 BASIC22.67■■□□□ 1.22
CRAMP1Q96RY5 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC22.67■■□□□ 1.22
CRAMP1Q96RY5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC22.67■■□□□ 1.22
CRAMP1Q96RY5 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CRAMP1Q96RY5 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
CRAMP1Q96RY5 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CRAMP1Q96RY5 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CRAMP1Q96RY5 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC22.66■■□□□ 1.22
CRAMP1Q96RY5 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CRAMP1Q96RY5 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC22.66■■□□□ 1.22
CRAMP1Q96RY5 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CRAMP1Q96RY5 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.66■■□□□ 1.22
CRAMP1Q96RY5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CRAMP1Q96RY5 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CRAMP1Q96RY5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC22.66■■□□□ 1.22
CRAMP1Q96RY5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CRAMP1Q96RY5 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CRAMP1Q96RY5 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CRAMP1Q96RY5 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CRAMP1Q96RY5 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC22.66■■□□□ 1.22
CRAMP1Q96RY5 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CRAMP1Q96RY5 AC008608.2-201ENST00000606089 416 ntBASIC22.66■■□□□ 1.22
CRAMP1Q96RY5 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC22.66■■□□□ 1.22
CRAMP1Q96RY5 AC139530.3-201ENST00000620344 690 ntBASIC22.66■■□□□ 1.22
CRAMP1Q96RY5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.66■■□□□ 1.22
CRAMP1Q96RY5 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CRAMP1Q96RY5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CRAMP1Q96RY5 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CRAMP1Q96RY5 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC22.66■■□□□ 1.22
CRAMP1Q96RY5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CRAMP1Q96RY5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CRAMP1Q96RY5 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CRAMP1Q96RY5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CRAMP1Q96RY5 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
CRAMP1Q96RY5 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC22.65■■□□□ 1.22
CRAMP1Q96RY5 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC22.65■■□□□ 1.22
CRAMP1Q96RY5 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC22.65■■□□□ 1.22
CRAMP1Q96RY5 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC22.65■■□□□ 1.22
CRAMP1Q96RY5 AC018712.1-201ENST00000455767 687 ntBASIC22.65■■□□□ 1.22
CRAMP1Q96RY5 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC22.65■■□□□ 1.22
CRAMP1Q96RY5 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC22.65■■□□□ 1.22
CRAMP1Q96RY5 ABBA01031661.1-201ENST00000634362 1253 ntBASIC22.65■■□□□ 1.22
CRAMP1Q96RY5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CRAMP1Q96RY5 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CRAMP1Q96RY5 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CRAMP1Q96RY5 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CRAMP1Q96RY5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC22.65■■□□□ 1.22
CRAMP1Q96RY5 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.65■■□□□ 1.22
CRAMP1Q96RY5 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CRAMP1Q96RY5 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CRAMP1Q96RY5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CRAMP1Q96RY5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.64■■□□□ 1.22
CRAMP1Q96RY5 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CRAMP1Q96RY5 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CRAMP1Q96RY5 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CRAMP1Q96RY5 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CRAMP1Q96RY5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CRAMP1Q96RY5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CRAMP1Q96RY5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.64■■□□□ 1.22
CRAMP1Q96RY5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC22.64■■□□□ 1.22
CRAMP1Q96RY5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CRAMP1Q96RY5 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CRAMP1Q96RY5 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CRAMP1Q96RY5 MIR149-201ENST00000384879 89 ntBASIC22.64■■□□□ 1.21
CRAMP1Q96RY5 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC22.64■■□□□ 1.21
CRAMP1Q96RY5 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC22.64■■□□□ 1.21
CRAMP1Q96RY5 RPP21-221ENST00000428040 594 ntTSL 2 BASIC22.64■■□□□ 1.21
CRAMP1Q96RY5 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CRAMP1Q96RY5 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC22.64■■□□□ 1.21
CRAMP1Q96RY5 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC22.64■■□□□ 1.21
CRAMP1Q96RY5 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC22.64■■□□□ 1.21
CRAMP1Q96RY5 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC22.64■■□□□ 1.21
CRAMP1Q96RY5 AC008687.5-201ENST00000593746 558 ntBASIC22.64■■□□□ 1.21
CRAMP1Q96RY5 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CRAMP1Q96RY5 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms