Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASD1Q96PB1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.81■□□□□ 0.76
CASD1Q96PB1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CASD1Q96PB1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASD1Q96PB1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CASD1Q96PB1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASD1Q96PB1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CASD1Q96PB1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.8■□□□□ 0.76
CASD1Q96PB1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.8■□□□□ 0.76
CASD1Q96PB1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CASD1Q96PB1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CASD1Q96PB1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.8■□□□□ 0.76
CASD1Q96PB1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CASD1Q96PB1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.8■□□□□ 0.76
CASD1Q96PB1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASD1Q96PB1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CASD1Q96PB1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASD1Q96PB1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.8■□□□□ 0.76
CASD1Q96PB1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASD1Q96PB1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASD1Q96PB1 AKR1C7P-201ENST00000305623 895 ntBASIC19.8■□□□□ 0.76
CASD1Q96PB1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASD1Q96PB1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.8■□□□□ 0.76
CASD1Q96PB1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASD1Q96PB1 SLC25A6P4-201ENST00000586535 553 ntBASIC19.8■□□□□ 0.76
CASD1Q96PB1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.8■□□□□ 0.76
CASD1Q96PB1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.8■□□□□ 0.76
CASD1Q96PB1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.8■□□□□ 0.76
CASD1Q96PB1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASD1Q96PB1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.8■□□□□ 0.76
CASD1Q96PB1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASD1Q96PB1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.8■□□□□ 0.76
CASD1Q96PB1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CASD1Q96PB1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
CASD1Q96PB1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CASD1Q96PB1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASD1Q96PB1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CASD1Q96PB1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CASD1Q96PB1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.79■□□□□ 0.76
CASD1Q96PB1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASD1Q96PB1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASD1Q96PB1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASD1Q96PB1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CASD1Q96PB1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.79■□□□□ 0.76
CASD1Q96PB1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CASD1Q96PB1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASD1Q96PB1 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASD1Q96PB1 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.79■□□□□ 0.76
CASD1Q96PB1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CASD1Q96PB1 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.79■□□□□ 0.76
CASD1Q96PB1 VENTXP7-201ENST00000475503 772 ntBASIC19.79■□□□□ 0.76
CASD1Q96PB1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CASD1Q96PB1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASD1Q96PB1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CASD1Q96PB1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASD1Q96PB1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASD1Q96PB1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASD1Q96PB1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASD1Q96PB1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASD1Q96PB1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASD1Q96PB1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.79■□□□□ 0.76
CASD1Q96PB1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASD1Q96PB1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.79■□□□□ 0.76
CASD1Q96PB1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CASD1Q96PB1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CASD1Q96PB1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CASD1Q96PB1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CASD1Q96PB1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
CASD1Q96PB1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASD1Q96PB1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASD1Q96PB1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASD1Q96PB1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASD1Q96PB1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASD1Q96PB1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CASD1Q96PB1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASD1Q96PB1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASD1Q96PB1 MRPL3P1-201ENST00000400109 1033 ntBASIC19.78■□□□□ 0.76
CASD1Q96PB1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.78■□□□□ 0.76
CASD1Q96PB1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASD1Q96PB1 AC011840.4-201ENST00000578471 627 ntBASIC19.78■□□□□ 0.76
CASD1Q96PB1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CASD1Q96PB1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASD1Q96PB1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CASD1Q96PB1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CASD1Q96PB1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
CASD1Q96PB1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASD1Q96PB1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASD1Q96PB1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASD1Q96PB1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASD1Q96PB1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASD1Q96PB1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CASD1Q96PB1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CASD1Q96PB1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASD1Q96PB1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.77■□□□□ 0.76
CASD1Q96PB1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CASD1Q96PB1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.77■□□□□ 0.76
CASD1Q96PB1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CASD1Q96PB1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.77■□□□□ 0.76
CASD1Q96PB1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASD1Q96PB1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms