Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 RNA5SP415-201ENST00000517246 115 ntBASIC17.72■□□□□ 0.43
CNTNAP3BQ96NU0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.72■□□□□ 0.43
CNTNAP3BQ96NU0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.72■□□□□ 0.43
CNTNAP3BQ96NU0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.72■□□□□ 0.43
CNTNAP3BQ96NU0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.72■□□□□ 0.43
CNTNAP3BQ96NU0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.72■□□□□ 0.43
CNTNAP3BQ96NU0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.72■□□□□ 0.43
CNTNAP3BQ96NU0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.72■□□□□ 0.43
CNTNAP3BQ96NU0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.72■□□□□ 0.43
CNTNAP3BQ96NU0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.72■□□□□ 0.43
CNTNAP3BQ96NU0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.72■□□□□ 0.43
CNTNAP3BQ96NU0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CNTNAP3BQ96NU0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNTNAP3BQ96NU0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CNTNAP3BQ96NU0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CNTNAP3BQ96NU0 KRT8P11-201ENST00000409686 1436 ntBASIC17.72■□□□□ 0.43
CNTNAP3BQ96NU0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNTNAP3BQ96NU0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CNTNAP3BQ96NU0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNTNAP3BQ96NU0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNTNAP3BQ96NU0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.71■□□□□ 0.43
CNTNAP3BQ96NU0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNTNAP3BQ96NU0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.71■□□□□ 0.43
CNTNAP3BQ96NU0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNTNAP3BQ96NU0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNTNAP3BQ96NU0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNTNAP3BQ96NU0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNTNAP3BQ96NU0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNTNAP3BQ96NU0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNTNAP3BQ96NU0 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.71■□□□□ 0.43
CNTNAP3BQ96NU0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.71■□□□□ 0.43
CNTNAP3BQ96NU0 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.71■□□□□ 0.43
CNTNAP3BQ96NU0 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.71■□□□□ 0.43
CNTNAP3BQ96NU0 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.71■□□□□ 0.43
CNTNAP3BQ96NU0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.71■□□□□ 0.43
CNTNAP3BQ96NU0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.71■□□□□ 0.43
CNTNAP3BQ96NU0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CNTNAP3BQ96NU0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.71■□□□□ 0.43
CNTNAP3BQ96NU0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
CNTNAP3BQ96NU0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNTNAP3BQ96NU0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNTNAP3BQ96NU0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNTNAP3BQ96NU0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CNTNAP3BQ96NU0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNTNAP3BQ96NU0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CNTNAP3BQ96NU0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.7■□□□□ 0.42
CNTNAP3BQ96NU0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNTNAP3BQ96NU0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.7■□□□□ 0.42
CNTNAP3BQ96NU0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.7■□□□□ 0.42
CNTNAP3BQ96NU0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.7■□□□□ 0.42
CNTNAP3BQ96NU0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
CNTNAP3BQ96NU0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNTNAP3BQ96NU0 TMEM179-206ENST00000616017 1645 ntBASIC17.7■□□□□ 0.42
CNTNAP3BQ96NU0 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNTNAP3BQ96NU0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.7■□□□□ 0.42
CNTNAP3BQ96NU0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNTNAP3BQ96NU0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNTNAP3BQ96NU0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CNTNAP3BQ96NU0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
CNTNAP3BQ96NU0 AC007967.2-201ENST00000432613 625 ntBASIC17.7■□□□□ 0.42
CNTNAP3BQ96NU0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.7■□□□□ 0.42
CNTNAP3BQ96NU0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNTNAP3BQ96NU0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNTNAP3BQ96NU0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.7■□□□□ 0.42
CNTNAP3BQ96NU0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNTNAP3BQ96NU0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
CNTNAP3BQ96NU0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.7■□□□□ 0.42
CNTNAP3BQ96NU0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 FGFR3P6-201ENST00000457012 610 ntBASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 AC005829.1-201ENST00000570002 483 ntBASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 MIR4745-201ENST00000577608 62 ntBASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 MIR3917-201ENST00000580971 93 ntBASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 AP001269.4-201ENST00000609611 512 ntBASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms