Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM2Q96JY6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.54■□□□□ 0.88
PDLIM2Q96JY6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.54■□□□□ 0.88
PDLIM2Q96JY6 AC105020.1-201ENST00000435356 2205 ntBASIC20.54■□□□□ 0.88
PDLIM2Q96JY6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM2Q96JY6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM2Q96JY6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PDLIM2Q96JY6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM2Q96JY6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PDLIM2Q96JY6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.54■□□□□ 0.88
PDLIM2Q96JY6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM2Q96JY6 ZNRF2P3-201ENST00000424200 374 ntBASIC20.54■□□□□ 0.88
PDLIM2Q96JY6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.54■□□□□ 0.88
PDLIM2Q96JY6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.54■□□□□ 0.88
PDLIM2Q96JY6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.54■□□□□ 0.88
PDLIM2Q96JY6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.54■□□□□ 0.88
PDLIM2Q96JY6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PDLIM2Q96JY6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.54■□□□□ 0.88
PDLIM2Q96JY6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM2Q96JY6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM2Q96JY6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PDLIM2Q96JY6 AGGF1P2-201ENST00000426656 2106 ntBASIC20.54■□□□□ 0.88
PDLIM2Q96JY6 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM2Q96JY6 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM2Q96JY6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM2Q96JY6 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.54■□□□□ 0.88
PDLIM2Q96JY6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM2Q96JY6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PDLIM2Q96JY6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM2Q96JY6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PDLIM2Q96JY6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM2Q96JY6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
PDLIM2Q96JY6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.53■□□□□ 0.88
PDLIM2Q96JY6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM2Q96JY6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
PDLIM2Q96JY6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM2Q96JY6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PDLIM2Q96JY6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM2Q96JY6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
PDLIM2Q96JY6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM2Q96JY6 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.53■□□□□ 0.88
PDLIM2Q96JY6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.53■□□□□ 0.88
PDLIM2Q96JY6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM2Q96JY6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PDLIM2Q96JY6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM2Q96JY6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.53■□□□□ 0.88
PDLIM2Q96JY6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM2Q96JY6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM2Q96JY6 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM2Q96JY6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDLIM2Q96JY6 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDLIM2Q96JY6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDLIM2Q96JY6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PDLIM2Q96JY6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.52■□□□□ 0.88
PDLIM2Q96JY6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC20.52■□□□□ 0.88
PDLIM2Q96JY6 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.52■□□□□ 0.88
PDLIM2Q96JY6 AC008894.3-201ENST00000624324 3103 ntBASIC20.52■□□□□ 0.88
PDLIM2Q96JY6 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDLIM2Q96JY6 PHGDH-209ENST00000641074 1780 ntBASIC20.52■□□□□ 0.88
PDLIM2Q96JY6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.52■□□□□ 0.88
PDLIM2Q96JY6 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PDLIM2Q96JY6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDLIM2Q96JY6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PDLIM2Q96JY6 MYLKP1-201ENST00000509077 1580 ntBASIC20.52■□□□□ 0.88
PDLIM2Q96JY6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PDLIM2Q96JY6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDLIM2Q96JY6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PDLIM2Q96JY6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.52■□□□□ 0.88
PDLIM2Q96JY6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.52■□□□□ 0.88
PDLIM2Q96JY6 AC005829.2-201ENST00000571422 1056 ntBASIC20.52■□□□□ 0.88
PDLIM2Q96JY6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.52■□□□□ 0.88
PDLIM2Q96JY6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
PDLIM2Q96JY6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PDLIM2Q96JY6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDLIM2Q96JY6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDLIM2Q96JY6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDLIM2Q96JY6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PDLIM2Q96JY6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PDLIM2Q96JY6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PDLIM2Q96JY6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PDLIM2Q96JY6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PDLIM2Q96JY6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PDLIM2Q96JY6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM2Q96JY6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.51■□□□□ 0.87
PDLIM2Q96JY6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM2Q96JY6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM2Q96JY6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM2Q96JY6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.51■□□□□ 0.87
PDLIM2Q96JY6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM2Q96JY6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM2Q96JY6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM2Q96JY6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM2Q96JY6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM2Q96JY6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.51■□□□□ 0.87
PDLIM2Q96JY6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM2Q96JY6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.51■□□□□ 0.87
PDLIM2Q96JY6 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM2Q96JY6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM2Q96JY6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM2Q96JY6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms