Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.73■□□□□ 0.11
SPG11Q96JI7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.73■□□□□ 0.11
SPG11Q96JI7 AC093909.1-201ENST00000504731 1122 ntBASIC15.73■□□□□ 0.11
SPG11Q96JI7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.73■□□□□ 0.11
SPG11Q96JI7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SPG11Q96JI7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPG11Q96JI7 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.73■□□□□ 0.11
SPG11Q96JI7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SPG11Q96JI7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SPG11Q96JI7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.73■□□□□ 0.11
SPG11Q96JI7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPG11Q96JI7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.73■□□□□ 0.11
SPG11Q96JI7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.73■□□□□ 0.11
SPG11Q96JI7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPG11Q96JI7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SPG11Q96JI7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.73■□□□□ 0.11
SPG11Q96JI7 AL691403.2-201ENST00000618460 490 ntBASIC15.73■□□□□ 0.11
SPG11Q96JI7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SPG11Q96JI7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SPG11Q96JI7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPG11Q96JI7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPG11Q96JI7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPG11Q96JI7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SPG11Q96JI7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPG11Q96JI7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.72■□□□□ 0.11
SPG11Q96JI7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPG11Q96JI7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.72■□□□□ 0.11
SPG11Q96JI7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.72■□□□□ 0.11
SPG11Q96JI7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.72■□□□□ 0.11
SPG11Q96JI7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SPG11Q96JI7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.72■□□□□ 0.11
SPG11Q96JI7 AC004967.1-201ENST00000453589 447 ntBASIC15.72■□□□□ 0.11
SPG11Q96JI7 AC132008.2-207ENST00000454517 770 ntBASIC15.72■□□□□ 0.11
SPG11Q96JI7 SCARNA2-201ENST00000458748 420 ntBASIC15.72■□□□□ 0.11
SPG11Q96JI7 RN7SL606P-201ENST00000472779 293 ntBASIC15.72■□□□□ 0.11
SPG11Q96JI7 AP003733.1-201ENST00000491725 852 ntBASIC15.72■□□□□ 0.11
SPG11Q96JI7 GUSBP12-201ENST00000513727 720 ntBASIC15.72■□□□□ 0.11
SPG11Q96JI7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SPG11Q96JI7 AL356488.2-201ENST00000602755 427 ntBASIC15.72■□□□□ 0.11
SPG11Q96JI7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.72■□□□□ 0.11
SPG11Q96JI7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.72■□□□□ 0.11
SPG11Q96JI7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.72■□□□□ 0.11
SPG11Q96JI7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPG11Q96JI7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.72■□□□□ 0.11
SPG11Q96JI7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SPG11Q96JI7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPG11Q96JI7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPG11Q96JI7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SPG11Q96JI7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPG11Q96JI7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.72■□□□□ 0.11
SPG11Q96JI7 LINC01006-201ENST00000333319 2292 ntBASIC15.72■□□□□ 0.11
SPG11Q96JI7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SPG11Q96JI7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SPG11Q96JI7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPG11Q96JI7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.72■□□□□ 0.11
SPG11Q96JI7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SPG11Q96JI7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.72■□□□□ 0.11
SPG11Q96JI7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.72■□□□□ 0.11
SPG11Q96JI7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.72■□□□□ 0.11
SPG11Q96JI7 MIR7706-201ENST00000613747 67 ntBASIC15.72■□□□□ 0.11
SPG11Q96JI7 AC134684.3-201ENST00000641758 218 ntBASIC15.72■□□□□ 0.11
SPG11Q96JI7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SPG11Q96JI7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPG11Q96JI7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPG11Q96JI7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SPG11Q96JI7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SPG11Q96JI7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPG11Q96JI7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPG11Q96JI7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SPG11Q96JI7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SPG11Q96JI7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SPG11Q96JI7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPG11Q96JI7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPG11Q96JI7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SPG11Q96JI7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SPG11Q96JI7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.71■□□□□ 0.11
SPG11Q96JI7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.71■□□□□ 0.11
SPG11Q96JI7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SPG11Q96JI7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
SPG11Q96JI7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC15.71■□□□□ 0.11
SPG11Q96JI7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.71■□□□□ 0.11
SPG11Q96JI7 AC034236.2-201ENST00000606662 1610 ntBASIC15.71■□□□□ 0.11
SPG11Q96JI7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPG11Q96JI7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPG11Q96JI7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SPG11Q96JI7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SPG11Q96JI7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.71■□□□□ 0.1
SPG11Q96JI7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC15.71■□□□□ 0.1
SPG11Q96JI7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SPG11Q96JI7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPG11Q96JI7 NUS1P2-201ENST00000417358 873 ntBASIC15.7■□□□□ 0.1
SPG11Q96JI7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
SPG11Q96JI7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
SPG11Q96JI7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.7■□□□□ 0.1
SPG11Q96JI7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.7■□□□□ 0.1
SPG11Q96JI7 SART3-203ENST00000546611 1184 ntBASIC15.7■□□□□ 0.1
SPG11Q96JI7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.7■□□□□ 0.1
SPG11Q96JI7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
SPG11Q96JI7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPG11Q96JI7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms