Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 AC092666.2-201ENST00000613287 246 ntBASIC16.15■□□□□ 0.18
CPNE2Q96FN4 AC104581.1-202ENST00000635932 2618 ntBASIC16.15■□□□□ 0.18
CPNE2Q96FN4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CPNE2Q96FN4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE2Q96FN4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.15■□□□□ 0.18
CPNE2Q96FN4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
CPNE2Q96FN4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE2Q96FN4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE2Q96FN4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.15■□□□□ 0.18
CPNE2Q96FN4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE2Q96FN4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE2Q96FN4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.15■□□□□ 0.18
CPNE2Q96FN4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CPNE2Q96FN4 BICD1-207ENST00000551848 1962 ntBASIC16.15■□□□□ 0.18
CPNE2Q96FN4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.15■□□□□ 0.18
CPNE2Q96FN4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CPNE2Q96FN4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 RCC2P6-201ENST00000526625 1557 ntBASIC16.14■□□□□ 0.17
CPNE2Q96FN4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 AL353807.1-201ENST00000427475 662 ntBASIC16.14■□□□□ 0.17
CPNE2Q96FN4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 AC090192.1-201ENST00000517740 490 ntBASIC16.14■□□□□ 0.17
CPNE2Q96FN4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CPNE2Q96FN4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 AC112777.1-201ENST00000540175 1423 ntBASIC16.13■□□□□ 0.17
CPNE2Q96FN4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 FER1L4-210ENST00000615531 5998 ntBASIC16.13■□□□□ 0.17
CPNE2Q96FN4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 Z85996.1-201ENST00000494644 937 ntBASIC16.13■□□□□ 0.17
CPNE2Q96FN4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 AL023875.1-201ENST00000640777 796 ntBASIC16.13■□□□□ 0.17
CPNE2Q96FN4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.13■□□□□ 0.17
CPNE2Q96FN4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.12■□□□□ 0.17
CPNE2Q96FN4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.12■□□□□ 0.17
CPNE2Q96FN4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms