Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.69■□□□□ 0.1
NEIL1Q96FI4 AL138966.2-201ENST00000621997 464 ntBASIC15.69■□□□□ 0.1
NEIL1Q96FI4 AC141257.4-201ENST00000634557 245 ntBASIC15.69■□□□□ 0.1
NEIL1Q96FI4 AC136944.6-201ENST00000634818 245 ntBASIC15.69■□□□□ 0.1
NEIL1Q96FI4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NEIL1Q96FI4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NEIL1Q96FI4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.69■□□□□ 0.1
NEIL1Q96FI4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NEIL1Q96FI4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.69■□□□□ 0.1
NEIL1Q96FI4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.69■□□□□ 0.1
NEIL1Q96FI4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NEIL1Q96FI4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NEIL1Q96FI4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NEIL1Q96FI4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NEIL1Q96FI4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 KRT8P45-201ENST00000414328 1447 ntBASIC15.68■□□□□ 0.1
NEIL1Q96FI4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 MCCD1P1-208ENST00000445732 328 ntBASIC15.68■□□□□ 0.1
NEIL1Q96FI4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 AC008622.2-201ENST00000617006 1229 ntBASIC15.68■□□□□ 0.1
NEIL1Q96FI4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NEIL1Q96FI4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 COX11P1-201ENST00000489116 835 ntBASIC15.67■□□□□ 0.1
NEIL1Q96FI4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 AC010331.1-201ENST00000611423 582 ntBASIC15.67■□□□□ 0.1
NEIL1Q96FI4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 AL031432.5-201ENST00000641059 760 ntBASIC15.67■□□□□ 0.1
NEIL1Q96FI4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 GPAT2P1-201ENST00000444924 1672 ntBASIC15.67■□□□□ 0.1
NEIL1Q96FI4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
NEIL1Q96FI4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
NEIL1Q96FI4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NEIL1Q96FI4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NEIL1Q96FI4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.66■□□□□ 0.1
NEIL1Q96FI4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NEIL1Q96FI4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NEIL1Q96FI4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.66■□□□□ 0.1
NEIL1Q96FI4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms