Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 RNA5SP419-201ENST00000515908 135 ntBASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 AC011840.4-201ENST00000578471 627 ntBASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 AL773604.1-201ENST00000617417 272 ntBASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNRNP40Q96DI7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNRNP40Q96DI7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRNP40Q96DI7 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.68■□□□□ 0.26
SNRNP40Q96DI7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.68■□□□□ 0.26
SNRNP40Q96DI7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.68■□□□□ 0.26
SNRNP40Q96DI7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SNRNP40Q96DI7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.68■□□□□ 0.26
SNRNP40Q96DI7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRNP40Q96DI7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SNRNP40Q96DI7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRNP40Q96DI7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
SNRNP40Q96DI7 KRT18P13-201ENST00000400056 1290 ntBASIC16.68■□□□□ 0.26
SNRNP40Q96DI7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNRNP40Q96DI7 FAM197Y8-203ENST00000450145 560 ntBASIC16.68■□□□□ 0.26
SNRNP40Q96DI7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.68■□□□□ 0.26
SNRNP40Q96DI7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNRNP40Q96DI7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.68■□□□□ 0.26
SNRNP40Q96DI7 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.68■□□□□ 0.26
SNRNP40Q96DI7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.68■□□□□ 0.26
SNRNP40Q96DI7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
SNRNP40Q96DI7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
SNRNP40Q96DI7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRNP40Q96DI7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.68■□□□□ 0.26
SNRNP40Q96DI7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRNP40Q96DI7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNRNP40Q96DI7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNRNP40Q96DI7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SNRNP40Q96DI7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNRNP40Q96DI7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNRNP40Q96DI7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNRNP40Q96DI7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.67■□□□□ 0.26
SNRNP40Q96DI7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNRNP40Q96DI7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.67■□□□□ 0.26
SNRNP40Q96DI7 POM121L3P-201ENST00000419331 1163 ntBASIC16.67■□□□□ 0.26
SNRNP40Q96DI7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.67■□□□□ 0.26
SNRNP40Q96DI7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNRNP40Q96DI7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.67■□□□□ 0.26
SNRNP40Q96DI7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.67■□□□□ 0.26
SNRNP40Q96DI7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.67■□□□□ 0.26
SNRNP40Q96DI7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.67■□□□□ 0.26
SNRNP40Q96DI7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.67■□□□□ 0.26
SNRNP40Q96DI7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.67■□□□□ 0.26
SNRNP40Q96DI7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNRNP40Q96DI7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNRNP40Q96DI7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.67■□□□□ 0.26
SNRNP40Q96DI7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNRNP40Q96DI7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNRNP40Q96DI7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.67■□□□□ 0.26
SNRNP40Q96DI7 FEM1AP3-201ENST00000403722 1741 ntBASIC16.67■□□□□ 0.26
SNRNP40Q96DI7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SNRNP40Q96DI7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNRNP40Q96DI7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SNRNP40Q96DI7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNRNP40Q96DI7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNRNP40Q96DI7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRNP40Q96DI7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRNP40Q96DI7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRNP40Q96DI7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRNP40Q96DI7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.66■□□□□ 0.26
SNRNP40Q96DI7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNRNP40Q96DI7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNRNP40Q96DI7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.66■□□□□ 0.26
SNRNP40Q96DI7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRNP40Q96DI7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRNP40Q96DI7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.66■□□□□ 0.26
SNRNP40Q96DI7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNRNP40Q96DI7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.66■□□□□ 0.26
SNRNP40Q96DI7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.66■□□□□ 0.26
SNRNP40Q96DI7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SNRNP40Q96DI7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNRNP40Q96DI7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms