Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.47■□□□□ 0.23
APH1AQ96BI3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
APH1AQ96BI3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
APH1AQ96BI3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.46■□□□□ 0.23
APH1AQ96BI3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
APH1AQ96BI3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
APH1AQ96BI3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.46■□□□□ 0.23
APH1AQ96BI3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
APH1AQ96BI3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.46■□□□□ 0.23
APH1AQ96BI3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.46■□□□□ 0.23
APH1AQ96BI3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
APH1AQ96BI3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
APH1AQ96BI3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.46■□□□□ 0.23
APH1AQ96BI3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
APH1AQ96BI3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
APH1AQ96BI3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
APH1AQ96BI3 MIR1224-201ENST00000408193 85 ntBASIC16.46■□□□□ 0.23
APH1AQ96BI3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
APH1AQ96BI3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
APH1AQ96BI3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.46■□□□□ 0.23
APH1AQ96BI3 HOMER2P1-201ENST00000455653 964 ntBASIC16.46■□□□□ 0.23
APH1AQ96BI3 GCSHP2-201ENST00000560971 527 ntBASIC16.46■□□□□ 0.23
APH1AQ96BI3 AL441883.1-201ENST00000566170 1045 ntBASIC16.46■□□□□ 0.23
APH1AQ96BI3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
APH1AQ96BI3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.46■□□□□ 0.23
APH1AQ96BI3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
APH1AQ96BI3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.46■□□□□ 0.23
APH1AQ96BI3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
APH1AQ96BI3 AL590326.2-201ENST00000625139 305 ntBASIC16.46■□□□□ 0.23
APH1AQ96BI3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
APH1AQ96BI3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.46■□□□□ 0.23
APH1AQ96BI3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
APH1AQ96BI3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
APH1AQ96BI3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
APH1AQ96BI3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.46■□□□□ 0.23
APH1AQ96BI3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.46■□□□□ 0.23
APH1AQ96BI3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
APH1AQ96BI3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
APH1AQ96BI3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
APH1AQ96BI3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
APH1AQ96BI3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
APH1AQ96BI3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APH1AQ96BI3 AP000974.1-201ENST00000623909 2387 ntBASIC16.45■□□□□ 0.22
APH1AQ96BI3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
APH1AQ96BI3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APH1AQ96BI3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APH1AQ96BI3 AC018445.3-201ENST00000624177 1945 ntBASIC16.45■□□□□ 0.22
APH1AQ96BI3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APH1AQ96BI3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.45■□□□□ 0.22
APH1AQ96BI3 AC063952.2-201ENST00000498792 1227 ntBASIC16.45■□□□□ 0.22
APH1AQ96BI3 AC034232.1-201ENST00000506026 1064 ntBASIC16.45■□□□□ 0.22
APH1AQ96BI3 AC022616.7-201ENST00000525383 220 ntBASIC16.45■□□□□ 0.22
APH1AQ96BI3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.45■□□□□ 0.22
APH1AQ96BI3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.45■□□□□ 0.22
APH1AQ96BI3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.45■□□□□ 0.22
APH1AQ96BI3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APH1AQ96BI3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.45■□□□□ 0.22
APH1AQ96BI3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
APH1AQ96BI3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.45■□□□□ 0.22
APH1AQ96BI3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
APH1AQ96BI3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
APH1AQ96BI3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APH1AQ96BI3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APH1AQ96BI3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.45■□□□□ 0.22
APH1AQ96BI3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
APH1AQ96BI3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
APH1AQ96BI3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
APH1AQ96BI3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
APH1AQ96BI3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APH1AQ96BI3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
APH1AQ96BI3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.45■□□□□ 0.22
APH1AQ96BI3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
APH1AQ96BI3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APH1AQ96BI3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
APH1AQ96BI3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APH1AQ96BI3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.44■□□□□ 0.22
APH1AQ96BI3 BX323043.1-201ENST00000641006 1765 ntBASIC16.44■□□□□ 0.22
APH1AQ96BI3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.44■□□□□ 0.22
APH1AQ96BI3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
APH1AQ96BI3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
APH1AQ96BI3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
APH1AQ96BI3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
APH1AQ96BI3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
APH1AQ96BI3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
APH1AQ96BI3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.44■□□□□ 0.22
APH1AQ96BI3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
APH1AQ96BI3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
APH1AQ96BI3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
APH1AQ96BI3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
APH1AQ96BI3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
APH1AQ96BI3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.44■□□□□ 0.22
APH1AQ96BI3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.44■□□□□ 0.22
APH1AQ96BI3 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.44■□□□□ 0.22
APH1AQ96BI3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.44■□□□□ 0.22
APH1AQ96BI3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.44■□□□□ 0.22
APH1AQ96BI3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.44■□□□□ 0.22
APH1AQ96BI3 MYC-208ENST00000641036 567 ntBASIC16.44■□□□□ 0.22
APH1AQ96BI3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
APH1AQ96BI3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
APH1AQ96BI3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms