Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.78■□□□□ 0.92
ATP6V0A1Q93050 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP6V0A1Q93050 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP6V0A1Q93050 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.78■□□□□ 0.92
ATP6V0A1Q93050 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP6V0A1Q93050 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP6V0A1Q93050 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
ATP6V0A1Q93050 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP6V0A1Q93050 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.78■□□□□ 0.92
ATP6V0A1Q93050 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.78■□□□□ 0.92
ATP6V0A1Q93050 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.78■□□□□ 0.92
ATP6V0A1Q93050 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
ATP6V0A1Q93050 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP6V0A1Q93050 AC079602.3-201ENST00000623931 403 ntBASIC20.78■□□□□ 0.92
ATP6V0A1Q93050 AL157888.1-201ENST00000631930 593 ntBASIC20.78■□□□□ 0.92
ATP6V0A1Q93050 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ATP6V0A1Q93050 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP6V0A1Q93050 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.78■□□□□ 0.92
ATP6V0A1Q93050 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP6V0A1Q93050 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP6V0A1Q93050 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.78■□□□□ 0.92
ATP6V0A1Q93050 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ATP6V0A1Q93050 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP6V0A1Q93050 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.78■□□□□ 0.92
ATP6V0A1Q93050 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.78■□□□□ 0.92
ATP6V0A1Q93050 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP6V0A1Q93050 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP6V0A1Q93050 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ATP6V0A1Q93050 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.77■□□□□ 0.92
ATP6V0A1Q93050 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP6V0A1Q93050 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP6V0A1Q93050 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP6V0A1Q93050 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP6V0A1Q93050 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.77■□□□□ 0.92
ATP6V0A1Q93050 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP6V0A1Q93050 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATP6V0A1Q93050 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.77■□□□□ 0.92
ATP6V0A1Q93050 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP6V0A1Q93050 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP6V0A1Q93050 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP6V0A1Q93050 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP6V0A1Q93050 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP6V0A1Q93050 BX276092.5-203ENST00000456199 560 ntBASIC20.77■□□□□ 0.92
ATP6V0A1Q93050 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.77■□□□□ 0.92
ATP6V0A1Q93050 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.77■□□□□ 0.92
ATP6V0A1Q93050 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP6V0A1Q93050 AC010240.3-201ENST00000607688 395 ntBASIC20.77■□□□□ 0.92
ATP6V0A1Q93050 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.77■□□□□ 0.92
ATP6V0A1Q93050 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATP6V0A1Q93050 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATP6V0A1Q93050 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATP6V0A1Q93050 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATP6V0A1Q93050 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP6V0A1Q93050 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP6V0A1Q93050 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP6V0A1Q93050 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
ATP6V0A1Q93050 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
ATP6V0A1Q93050 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP6V0A1Q93050 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP6V0A1Q93050 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP6V0A1Q93050 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP6V0A1Q93050 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP6V0A1Q93050 TPM4P1-201ENST00000436100 807 ntBASIC20.76■□□□□ 0.91
ATP6V0A1Q93050 TSSC2-201ENST00000450217 709 ntBASIC20.76■□□□□ 0.91
ATP6V0A1Q93050 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.76■□□□□ 0.91
ATP6V0A1Q93050 MIR3180-4-201ENST00000582223 153 ntBASIC20.76■□□□□ 0.91
ATP6V0A1Q93050 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP6V0A1Q93050 AC092329.2-201ENST00000598402 547 ntBASIC20.76■□□□□ 0.91
ATP6V0A1Q93050 AL121672.3-201ENST00000608644 468 ntBASIC20.76■□□□□ 0.91
ATP6V0A1Q93050 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.76■□□□□ 0.91
ATP6V0A1Q93050 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP6V0A1Q93050 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP6V0A1Q93050 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP6V0A1Q93050 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP6V0A1Q93050 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP6V0A1Q93050 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ATP6V0A1Q93050 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP6V0A1Q93050 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP6V0A1Q93050 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP6V0A1Q93050 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP6V0A1Q93050 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
ATP6V0A1Q93050 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.75■□□□□ 0.91
ATP6V0A1Q93050 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ATP6V0A1Q93050 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP6V0A1Q93050 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP6V0A1Q93050 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.75■□□□□ 0.91
ATP6V0A1Q93050 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP6V0A1Q93050 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP6V0A1Q93050 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP6V0A1Q93050 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP6V0A1Q93050 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATP6V0A1Q93050 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP6V0A1Q93050 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.75■□□□□ 0.91
ATP6V0A1Q93050 KRT18P41-201ENST00000518924 1277 ntBASIC20.75■□□□□ 0.91
ATP6V0A1Q93050 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
ATP6V0A1Q93050 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP6V0A1Q93050 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.75■□□□□ 0.91
ATP6V0A1Q93050 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ATP6V0A1Q93050 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATP6V0A1Q93050 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms