Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 AC068587.9-201ENST00000641814 219 ntBASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.54■□□□□ 0.56
RAB3IL1Q8TBN0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 CROCCP5-201ENST00000436658 830 ntBASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 AL160286.2-201ENST00000567150 934 ntBASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RAB3IL1Q8TBN0 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB3IL1Q8TBN0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.52■□□□□ 0.56
RAB3IL1Q8TBN0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.52■□□□□ 0.56
RAB3IL1Q8TBN0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB3IL1Q8TBN0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB3IL1Q8TBN0 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RAB3IL1Q8TBN0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB3IL1Q8TBN0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.52■□□□□ 0.56
RAB3IL1Q8TBN0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
RAB3IL1Q8TBN0 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.52■□□□□ 0.56
RAB3IL1Q8TBN0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB3IL1Q8TBN0 AC112777.1-201ENST00000540175 1423 ntBASIC18.52■□□□□ 0.56
RAB3IL1Q8TBN0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB3IL1Q8TBN0 DUSP5P2-201ENST00000426873 1033 ntBASIC18.52■□□□□ 0.56
RAB3IL1Q8TBN0 AC006970.2-201ENST00000450065 779 ntBASIC18.52■□□□□ 0.56
RAB3IL1Q8TBN0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB3IL1Q8TBN0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.52■□□□□ 0.56
RAB3IL1Q8TBN0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.52■□□□□ 0.56
RAB3IL1Q8TBN0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB3IL1Q8TBN0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB3IL1Q8TBN0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB3IL1Q8TBN0 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB3IL1Q8TBN0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB3IL1Q8TBN0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAB3IL1Q8TBN0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RAB3IL1Q8TBN0 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
RAB3IL1Q8TBN0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAB3IL1Q8TBN0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
RAB3IL1Q8TBN0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RAB3IL1Q8TBN0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
RAB3IL1Q8TBN0 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
RAB3IL1Q8TBN0 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.52■□□□□ 0.55
RAB3IL1Q8TBN0 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 AC135776.1-201ENST00000319817 2481 ntBASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms