Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.65■□□□□ 0.74
UBA3Q8TBC4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBA3Q8TBC4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBA3Q8TBC4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.65■□□□□ 0.74
UBA3Q8TBC4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBA3Q8TBC4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBA3Q8TBC4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
UBA3Q8TBC4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBA3Q8TBC4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
UBA3Q8TBC4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBA3Q8TBC4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.65■□□□□ 0.74
UBA3Q8TBC4 BX664615.1-201ENST00000443558 458 ntBASIC19.65■□□□□ 0.74
UBA3Q8TBC4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.65■□□□□ 0.74
UBA3Q8TBC4 AC104076.2-201ENST00000448912 469 ntBASIC19.65■□□□□ 0.74
UBA3Q8TBC4 COX11P1-201ENST00000489116 835 ntBASIC19.65■□□□□ 0.74
UBA3Q8TBC4 AC140113.3-201ENST00000605663 199 ntBASIC19.65■□□□□ 0.74
UBA3Q8TBC4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBA3Q8TBC4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.65■□□□□ 0.74
UBA3Q8TBC4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.65■□□□□ 0.74
UBA3Q8TBC4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBA3Q8TBC4 KRT8P50-201ENST00000562022 1438 ntBASIC19.65■□□□□ 0.74
UBA3Q8TBC4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBA3Q8TBC4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.65■□□□□ 0.74
UBA3Q8TBC4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBA3Q8TBC4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
UBA3Q8TBC4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.65■□□□□ 0.74
UBA3Q8TBC4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
UBA3Q8TBC4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
UBA3Q8TBC4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
UBA3Q8TBC4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.64■□□□□ 0.74
UBA3Q8TBC4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
UBA3Q8TBC4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.64■□□□□ 0.73
UBA3Q8TBC4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBA3Q8TBC4 TMPOP1-202ENST00000424642 1267 ntBASIC19.64■□□□□ 0.73
UBA3Q8TBC4 AC117947.1-201ENST00000427448 529 ntBASIC19.64■□□□□ 0.73
UBA3Q8TBC4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.64■□□□□ 0.73
UBA3Q8TBC4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
UBA3Q8TBC4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
UBA3Q8TBC4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.64■□□□□ 0.73
UBA3Q8TBC4 NEK4P2-201ENST00000580004 1012 ntBASIC19.64■□□□□ 0.73
UBA3Q8TBC4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.64■□□□□ 0.73
UBA3Q8TBC4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.64■□□□□ 0.73
UBA3Q8TBC4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.64■□□□□ 0.73
UBA3Q8TBC4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBA3Q8TBC4 AC006011.2-201ENST00000621313 1158 ntBASIC19.64■□□□□ 0.73
UBA3Q8TBC4 AC011558.1-201ENST00000623459 338 ntBASIC19.64■□□□□ 0.73
UBA3Q8TBC4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.64■□□□□ 0.73
UBA3Q8TBC4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
UBA3Q8TBC4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.64■□□□□ 0.73
UBA3Q8TBC4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBA3Q8TBC4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBA3Q8TBC4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBA3Q8TBC4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBA3Q8TBC4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBA3Q8TBC4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.64■□□□□ 0.73
UBA3Q8TBC4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
UBA3Q8TBC4 AC104581.1-202ENST00000635932 2618 ntBASIC19.64■□□□□ 0.73
UBA3Q8TBC4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBA3Q8TBC4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 AC112777.1-201ENST00000540175 1423 ntBASIC19.63■□□□□ 0.73
UBA3Q8TBC4 HOXB1-202ENST00000577092 1414 ntBASIC19.63■□□□□ 0.73
UBA3Q8TBC4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.63■□□□□ 0.73
UBA3Q8TBC4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 KRT18P41-201ENST00000518924 1277 ntBASIC19.63■□□□□ 0.73
UBA3Q8TBC4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 GCSHP2-201ENST00000560971 527 ntBASIC19.63■□□□□ 0.73
UBA3Q8TBC4 AL441883.1-201ENST00000566170 1045 ntBASIC19.63■□□□□ 0.73
UBA3Q8TBC4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBA3Q8TBC4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms