Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 MINOS1P3-201ENST00000457048 203 ntBASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 AC009065.1-201ENST00000564055 1225 ntBASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 MIR3180-4-201ENST00000582223 153 ntBASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 AC005104.2-201ENST00000427818 678 ntBASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 AC018712.1-201ENST00000455767 687 ntBASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 AC148477.8-201ENST00000624298 468 ntBASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 ZNF259P1-201ENST00000407656 1365 ntBASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SNIP1Q8TAD8 AC007952.6-201ENST00000573168 2673 ntBASIC17.46■□□□□ 0.39
SNIP1Q8TAD8 AC003957.1-201ENST00000625108 2673 ntBASIC17.46■□□□□ 0.39
SNIP1Q8TAD8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SNIP1Q8TAD8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNIP1Q8TAD8 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.46■□□□□ 0.39
SNIP1Q8TAD8 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNIP1Q8TAD8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.46■□□□□ 0.39
SNIP1Q8TAD8 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.46■□□□□ 0.39
SNIP1Q8TAD8 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SNIP1Q8TAD8 RPL13AP23-201ENST00000480739 586 ntBASIC17.46■□□□□ 0.39
SNIP1Q8TAD8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.46■□□□□ 0.39
SNIP1Q8TAD8 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNIP1Q8TAD8 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.46■□□□□ 0.39
SNIP1Q8TAD8 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.46■□□□□ 0.39
SNIP1Q8TAD8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.46■□□□□ 0.39
SNIP1Q8TAD8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.46■□□□□ 0.39
SNIP1Q8TAD8 AC139887.3-201ENST00000568585 713 ntBASIC17.46■□□□□ 0.39
SNIP1Q8TAD8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.46■□□□□ 0.39
SNIP1Q8TAD8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.46■□□□□ 0.39
SNIP1Q8TAD8 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.46■□□□□ 0.39
SNIP1Q8TAD8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SNIP1Q8TAD8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.46■□□□□ 0.39
SNIP1Q8TAD8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNIP1Q8TAD8 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNIP1Q8TAD8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNIP1Q8TAD8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
SNIP1Q8TAD8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
SNIP1Q8TAD8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms