Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 GOLGA6L5P-202ENST00000515341 1828 ntBASIC13.9□□□□□ -0.18
NUP35Q8NFH5 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 SUDS3P1-201ENST00000505831 966 ntBASIC13.9□□□□□ -0.18
NUP35Q8NFH5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
NUP35Q8NFH5 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
NUP35Q8NFH5 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
NUP35Q8NFH5 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
NUP35Q8NFH5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC13.9□□□□□ -0.19
NUP35Q8NFH5 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.19
NUP35Q8NFH5 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 NFYC-AS1-201ENST00000606277 1687 ntBASIC13.89□□□□□ -0.19
NUP35Q8NFH5 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 GAS2L1P1-201ENST00000420145 1480 ntBASIC13.89□□□□□ -0.19
NUP35Q8NFH5 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 TSPY21P-201ENST00000433481 731 ntBASIC13.89□□□□□ -0.19
NUP35Q8NFH5 SERP1-205ENST00000487153 657 ntTSL 4 BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 STOX2-205ENST00000513034 807 ntTSL 3 BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 KRT18P14-201ENST00000534205 1250 ntBASIC13.89□□□□□ -0.19
NUP35Q8NFH5 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 MTMR9LP-203ENST00000426597 1545 ntBASIC13.89□□□□□ -0.19
NUP35Q8NFH5 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NUP35Q8NFH5 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC13.88□□□□□ -0.19
NUP35Q8NFH5 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NUP35Q8NFH5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NUP35Q8NFH5 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.88□□□□□ -0.19
NUP35Q8NFH5 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NUP35Q8NFH5 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.88□□□□□ -0.19
NUP35Q8NFH5 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms