Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HIPK4Q8NE63 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.05■□□□□ 0.48
HIPK4Q8NE63 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HIPK4Q8NE63 AC091874.3-201ENST00000512672 1195 ntBASIC18.05■□□□□ 0.48
HIPK4Q8NE63 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.05■□□□□ 0.48
HIPK4Q8NE63 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.05■□□□□ 0.48
HIPK4Q8NE63 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.05■□□□□ 0.48
HIPK4Q8NE63 AL121906.2-201ENST00000621597 723 ntBASIC18.05■□□□□ 0.48
HIPK4Q8NE63 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HIPK4Q8NE63 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.05■□□□□ 0.48
HIPK4Q8NE63 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HIPK4Q8NE63 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
HIPK4Q8NE63 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HIPK4Q8NE63 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HIPK4Q8NE63 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.05■□□□□ 0.48
HIPK4Q8NE63 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
HIPK4Q8NE63 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.05■□□□□ 0.48
HIPK4Q8NE63 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HIPK4Q8NE63 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HIPK4Q8NE63 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HIPK4Q8NE63 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.05■□□□□ 0.48
HIPK4Q8NE63 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIPK4Q8NE63 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HIPK4Q8NE63 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
HIPK4Q8NE63 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.04■□□□□ 0.48
HIPK4Q8NE63 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIPK4Q8NE63 AP006587.1-201ENST00000534129 1502 ntBASIC18.04■□□□□ 0.48
HIPK4Q8NE63 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIPK4Q8NE63 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
HIPK4Q8NE63 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.04■□□□□ 0.48
HIPK4Q8NE63 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIPK4Q8NE63 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.04■□□□□ 0.48
HIPK4Q8NE63 YBX1P10-201ENST00000444752 975 ntBASIC18.04■□□□□ 0.48
HIPK4Q8NE63 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.04■□□□□ 0.48
HIPK4Q8NE63 AC083906.2-201ENST00000511578 360 ntBASIC18.04■□□□□ 0.48
HIPK4Q8NE63 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.04■□□□□ 0.48
HIPK4Q8NE63 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.04■□□□□ 0.48
HIPK4Q8NE63 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIPK4Q8NE63 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIPK4Q8NE63 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
HIPK4Q8NE63 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIPK4Q8NE63 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HIPK4Q8NE63 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIPK4Q8NE63 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.04■□□□□ 0.48
HIPK4Q8NE63 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HIPK4Q8NE63 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.04■□□□□ 0.48
HIPK4Q8NE63 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 KRT8P8-201ENST00000434750 1448 ntBASIC18.03■□□□□ 0.48
HIPK4Q8NE63 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 AL162741.1-201ENST00000565563 1558 ntBASIC18.03■□□□□ 0.48
HIPK4Q8NE63 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
HIPK4Q8NE63 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
HIPK4Q8NE63 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
HIPK4Q8NE63 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.02■□□□□ 0.48
HIPK4Q8NE63 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HIPK4Q8NE63 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.02■□□□□ 0.48
HIPK4Q8NE63 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HIPK4Q8NE63 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HIPK4Q8NE63 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HIPK4Q8NE63 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HIPK4Q8NE63 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HIPK4Q8NE63 GNAS-203ENST00000306120 1878 ntBASIC18.02■□□□□ 0.48
HIPK4Q8NE63 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HIPK4Q8NE63 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.02■□□□□ 0.48
HIPK4Q8NE63 AC006970.2-201ENST00000450065 779 ntBASIC18.02■□□□□ 0.48
HIPK4Q8NE63 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms