Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SIMC1Q8NDZ2 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIMC1Q8NDZ2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
SIMC1Q8NDZ2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIMC1Q8NDZ2 Z98044.1-201ENST00000632503 1764 ntBASIC17.5■□□□□ 0.39
SIMC1Q8NDZ2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIMC1Q8NDZ2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SIMC1Q8NDZ2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.5■□□□□ 0.39
SIMC1Q8NDZ2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 AC007663.1-201ENST00000438948 1240 ntBASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 AL353719.1-201ENST00000566847 864 ntBASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 AC009113.1-201ENST00000570267 2443 ntBASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.49■□□□□ 0.39
SIMC1Q8NDZ2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 AC099343.3-201ENST00000605834 2503 ntBASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 TSPY14P-201ENST00000303979 915 ntBASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 AC211429.1-201ENST00000415277 523 ntBASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 SLC25A1P2-201ENST00000430693 912 ntBASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 ECEL1P2-202ENST00000465689 757 ntBASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.48■□□□□ 0.39
SIMC1Q8NDZ2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms