Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.86■□□□□ 0.93
SLC17A8Q8NDX2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC17A8Q8NDX2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.86■□□□□ 0.93
SLC17A8Q8NDX2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC17A8Q8NDX2 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.86■□□□□ 0.93
SLC17A8Q8NDX2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC17A8Q8NDX2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC17A8Q8NDX2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC17A8Q8NDX2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
SLC17A8Q8NDX2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC17A8Q8NDX2 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC17A8Q8NDX2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC17A8Q8NDX2 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC17A8Q8NDX2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
SLC17A8Q8NDX2 AC007663.1-201ENST00000438948 1240 ntBASIC20.86■□□□□ 0.93
SLC17A8Q8NDX2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.86■□□□□ 0.93
SLC17A8Q8NDX2 TSPY17P-201ENST00000450329 467 ntBASIC20.86■□□□□ 0.93
SLC17A8Q8NDX2 AC091304.2-201ENST00000564639 760 ntBASIC20.86■□□□□ 0.93
SLC17A8Q8NDX2 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
SLC17A8Q8NDX2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC17A8Q8NDX2 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC17A8Q8NDX2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC17A8Q8NDX2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC17A8Q8NDX2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC17A8Q8NDX2 LINC01311-201ENST00000565162 1445 ntBASIC20.86■□□□□ 0.93
SLC17A8Q8NDX2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SLC17A8Q8NDX2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC17A8Q8NDX2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC17A8Q8NDX2 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SLC17A8Q8NDX2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SLC17A8Q8NDX2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC17A8Q8NDX2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC17A8Q8NDX2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC17A8Q8NDX2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC17A8Q8NDX2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC17A8Q8NDX2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC17A8Q8NDX2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
SLC17A8Q8NDX2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC17A8Q8NDX2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.85■□□□□ 0.93
SLC17A8Q8NDX2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC17A8Q8NDX2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
SLC17A8Q8NDX2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC17A8Q8NDX2 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC17A8Q8NDX2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC17A8Q8NDX2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC17A8Q8NDX2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC17A8Q8NDX2 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC17A8Q8NDX2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC17A8Q8NDX2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC17A8Q8NDX2 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.85■□□□□ 0.93
SLC17A8Q8NDX2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.85■□□□□ 0.93
SLC17A8Q8NDX2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC17A8Q8NDX2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SLC17A8Q8NDX2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC17A8Q8NDX2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC17A8Q8NDX2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC17A8Q8NDX2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC17A8Q8NDX2 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC17A8Q8NDX2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC17A8Q8NDX2 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
SLC17A8Q8NDX2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC17A8Q8NDX2 HLA-J-202ENST00000469281 1241 ntBASIC20.84■□□□□ 0.93
SLC17A8Q8NDX2 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC20.84■□□□□ 0.93
SLC17A8Q8NDX2 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.84■□□□□ 0.93
SLC17A8Q8NDX2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC17A8Q8NDX2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC17A8Q8NDX2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC17A8Q8NDX2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC17A8Q8NDX2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC17A8Q8NDX2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC17A8Q8NDX2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC17A8Q8NDX2 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SLC17A8Q8NDX2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SLC17A8Q8NDX2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC17A8Q8NDX2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC17A8Q8NDX2 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SLC17A8Q8NDX2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC17A8Q8NDX2 AC087289.5-201ENST00000586076 3175 ntBASIC20.83■□□□□ 0.93
SLC17A8Q8NDX2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC17A8Q8NDX2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.83■□□□□ 0.93
SLC17A8Q8NDX2 PMS2P7-201ENST00000506558 1336 ntBASIC20.83■□□□□ 0.93
SLC17A8Q8NDX2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC17A8Q8NDX2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms