Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC006333.2-201ENST00000607957 2099 ntBASIC29.01■■■□□ 2.24
CFAP43Q8NDM7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC29.01■■■□□ 2.23
CFAP43Q8NDM7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC29.01■■■□□ 2.23
CFAP43Q8NDM7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC29.01■■■□□ 2.23
CFAP43Q8NDM7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
CFAP43Q8NDM7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC29.01■■■□□ 2.23
CFAP43Q8NDM7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
CFAP43Q8NDM7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC29.01■■■□□ 2.23
CFAP43Q8NDM7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC29.01■■■□□ 2.23
CFAP43Q8NDM7 AC083906.6-201ENST00000641366 219 ntBASIC29.01■■■□□ 2.23
CFAP43Q8NDM7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC29.01■■■□□ 2.23
CFAP43Q8NDM7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
CFAP43Q8NDM7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC29.01■■■□□ 2.23
CFAP43Q8NDM7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC29.01■■■□□ 2.23
CFAP43Q8NDM7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC29■■■□□ 2.23
CFAP43Q8NDM7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC29■■■□□ 2.23
CFAP43Q8NDM7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
CFAP43Q8NDM7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC29■■■□□ 2.23
CFAP43Q8NDM7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
CFAP43Q8NDM7 AC091607.1-201ENST00000490318 1060 ntBASIC29■■■□□ 2.23
CFAP43Q8NDM7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC29■■■□□ 2.23
CFAP43Q8NDM7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC29■■■□□ 2.23
CFAP43Q8NDM7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC29■■■□□ 2.23
CFAP43Q8NDM7 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC29■■■□□ 2.23
CFAP43Q8NDM7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
CFAP43Q8NDM7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC29■■■□□ 2.23
CFAP43Q8NDM7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC29■■■□□ 2.23
CFAP43Q8NDM7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC29■■■□□ 2.23
CFAP43Q8NDM7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
CFAP43Q8NDM7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
CFAP43Q8NDM7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC28.99■■■□□ 2.23
CFAP43Q8NDM7 AC073648.2-201ENST00000510116 352 ntBASIC28.99■■■□□ 2.23
CFAP43Q8NDM7 PGAM5P1-201ENST00000518923 814 ntBASIC28.99■■■□□ 2.23
CFAP43Q8NDM7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC28.99■■■□□ 2.23
CFAP43Q8NDM7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
CFAP43Q8NDM7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
CFAP43Q8NDM7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
CFAP43Q8NDM7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
CFAP43Q8NDM7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC28.99■■■□□ 2.23
CFAP43Q8NDM7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC28.99■■■□□ 2.23
CFAP43Q8NDM7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC28.99■■■□□ 2.23
CFAP43Q8NDM7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
CFAP43Q8NDM7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC28.99■■■□□ 2.23
CFAP43Q8NDM7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC28.99■■■□□ 2.23
CFAP43Q8NDM7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
CFAP43Q8NDM7 FAM197Y8-203ENST00000450145 560 ntBASIC28.99■■■□□ 2.23
CFAP43Q8NDM7 VENTXP7-201ENST00000475503 772 ntBASIC28.99■■■□□ 2.23
CFAP43Q8NDM7 AP003733.1-201ENST00000491725 852 ntBASIC28.99■■■□□ 2.23
CFAP43Q8NDM7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC28.99■■■□□ 2.23
CFAP43Q8NDM7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC28.99■■■□□ 2.23
CFAP43Q8NDM7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
CFAP43Q8NDM7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC28.98■■■□□ 2.23
CFAP43Q8NDM7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
CFAP43Q8NDM7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
CFAP43Q8NDM7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC28.98■■■□□ 2.23
CFAP43Q8NDM7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
CFAP43Q8NDM7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
CFAP43Q8NDM7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC28.98■■■□□ 2.23
CFAP43Q8NDM7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
CFAP43Q8NDM7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC28.98■■■□□ 2.23
CFAP43Q8NDM7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
CFAP43Q8NDM7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
CFAP43Q8NDM7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC28.98■■■□□ 2.23
CFAP43Q8NDM7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
CFAP43Q8NDM7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC28.98■■■□□ 2.23
CFAP43Q8NDM7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
CFAP43Q8NDM7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
CFAP43Q8NDM7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
CFAP43Q8NDM7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC28.97■■■□□ 2.23
CFAP43Q8NDM7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC28.97■■■□□ 2.23
CFAP43Q8NDM7 MOK-208ENST00000519058 917 ntTSL 2 BASIC28.97■■■□□ 2.23
CFAP43Q8NDM7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC28.97■■■□□ 2.23
CFAP43Q8NDM7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC28.97■■■□□ 2.23
CFAP43Q8NDM7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
CFAP43Q8NDM7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
CFAP43Q8NDM7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
CFAP43Q8NDM7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC28.97■■■□□ 2.23
CFAP43Q8NDM7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
CFAP43Q8NDM7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
CFAP43Q8NDM7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC28.97■■■□□ 2.23
CFAP43Q8NDM7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
CFAP43Q8NDM7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC28.96■■■□□ 2.23
CFAP43Q8NDM7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC28.96■■■□□ 2.23
CFAP43Q8NDM7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
CFAP43Q8NDM7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
CFAP43Q8NDM7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
CFAP43Q8NDM7 MIR564-202ENST00000385049 94 ntBASIC28.96■■■□□ 2.23
CFAP43Q8NDM7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
CFAP43Q8NDM7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC28.96■■■□□ 2.23
CFAP43Q8NDM7 TERC-201ENST00000602385 541 ntBASIC28.96■■■□□ 2.23
CFAP43Q8NDM7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
CFAP43Q8NDM7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
CFAP43Q8NDM7 PMS2P7-201ENST00000506558 1336 ntBASIC28.96■■■□□ 2.23
CFAP43Q8NDM7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
CFAP43Q8NDM7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
CFAP43Q8NDM7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC28.96■■■□□ 2.23
CFAP43Q8NDM7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC28.96■■■□□ 2.23
CFAP43Q8NDM7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
CFAP43Q8NDM7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC28.96■■■□□ 2.23
CFAP43Q8NDM7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC28.96■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms