Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
KDM1BQ8NB78 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
KDM1BQ8NB78 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
KDM1BQ8NB78 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
KDM1BQ8NB78 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.97■□□□□ 0.63
KDM1BQ8NB78 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.97■□□□□ 0.63
KDM1BQ8NB78 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
KDM1BQ8NB78 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 VENTXP5-201ENST00000523979 775 ntBASIC18.96■□□□□ 0.63
KDM1BQ8NB78 MIR3917-201ENST00000580971 93 ntBASIC18.96■□□□□ 0.63
KDM1BQ8NB78 MIR3180-4-201ENST00000582223 153 ntBASIC18.96■□□□□ 0.63
KDM1BQ8NB78 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 AC068587.9-201ENST00000641814 219 ntBASIC18.96■□□□□ 0.63
KDM1BQ8NB78 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.96■□□□□ 0.63
KDM1BQ8NB78 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 AC104390.1-201ENST00000555663 520 ntBASIC18.95■□□□□ 0.62
KDM1BQ8NB78 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 AC120498.9-201ENST00000339021 3867 ntBASIC18.95■□□□□ 0.62
KDM1BQ8NB78 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.95■□□□□ 0.62
KDM1BQ8NB78 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
KDM1BQ8NB78 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
KDM1BQ8NB78 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.94■□□□□ 0.62
KDM1BQ8NB78 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
KDM1BQ8NB78 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KDM1BQ8NB78 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
KDM1BQ8NB78 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
KDM1BQ8NB78 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.94■□□□□ 0.62
KDM1BQ8NB78 AC034236.2-201ENST00000606662 1610 ntBASIC18.94■□□□□ 0.62
KDM1BQ8NB78 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KDM1BQ8NB78 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KDM1BQ8NB78 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KDM1BQ8NB78 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
KDM1BQ8NB78 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KDM1BQ8NB78 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.94■□□□□ 0.62
KDM1BQ8NB78 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.94■□□□□ 0.62
KDM1BQ8NB78 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KDM1BQ8NB78 KRT18P23-201ENST00000435622 1283 ntBASIC18.94■□□□□ 0.62
KDM1BQ8NB78 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.94■□□□□ 0.62
KDM1BQ8NB78 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.94■□□□□ 0.62
KDM1BQ8NB78 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.94■□□□□ 0.62
KDM1BQ8NB78 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KDM1BQ8NB78 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KDM1BQ8NB78 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KDM1BQ8NB78 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms