Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
LRTM2Q8N967 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM2Q8N967 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM2Q8N967 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM2Q8N967 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM2Q8N967 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LRTM2Q8N967 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM2Q8N967 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.18■□□□□ 0.02
LRTM2Q8N967 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.18■□□□□ 0.02
LRTM2Q8N967 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRTM2Q8N967 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.18■□□□□ 0.02
LRTM2Q8N967 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.17■□□□□ 0.02
LRTM2Q8N967 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LRTM2Q8N967 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LRTM2Q8N967 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM2Q8N967 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM2Q8N967 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
LRTM2Q8N967 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.17■□□□□ 0.02
LRTM2Q8N967 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.17■□□□□ 0.02
LRTM2Q8N967 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM2Q8N967 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM2Q8N967 AC141586.5-201ENST00000624546 2050 ntBASIC15.17■□□□□ 0.02
LRTM2Q8N967 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM2Q8N967 AC006116.8-202ENST00000587620 1550 ntBASIC15.17■□□□□ 0.02
LRTM2Q8N967 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM2Q8N967 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.17■□□□□ 0.02
LRTM2Q8N967 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.17■□□□□ 0.02
LRTM2Q8N967 PNMA6B-201ENST00000538162 1200 ntBASIC15.17■□□□□ 0.02
LRTM2Q8N967 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.17■□□□□ 0.02
LRTM2Q8N967 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.17■□□□□ 0.02
LRTM2Q8N967 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC15.17■□□□□ 0.02
LRTM2Q8N967 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LRTM2Q8N967 AL050303.2-201ENST00000619798 666 ntBASIC15.17■□□□□ 0.02
LRTM2Q8N967 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.17■□□□□ 0.02
LRTM2Q8N967 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LRTM2Q8N967 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM2Q8N967 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM2Q8N967 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.17■□□□□ 0.02
LRTM2Q8N967 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.17■□□□□ 0.02
LRTM2Q8N967 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.17■□□□□ 0.02
LRTM2Q8N967 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM2Q8N967 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LRTM2Q8N967 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.17■□□□□ 0.02
LRTM2Q8N967 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM2Q8N967 PCDHA12-202ENST00000613593 2588 ntBASIC15.17■□□□□ 0.02
LRTM2Q8N967 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM2Q8N967 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LRTM2Q8N967 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRTM2Q8N967 HTR7P1-201ENST00000538670 1336 ntBASIC15.17■□□□□ 0.02
LRTM2Q8N967 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.17■□□□□ 0.02
LRTM2Q8N967 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM2Q8N967 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM2Q8N967 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM2Q8N967 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM2Q8N967 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM2Q8N967 AC099398.1-201ENST00000567919 2776 ntBASIC15.16■□□□□ 0.02
LRTM2Q8N967 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
LRTM2Q8N967 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM2Q8N967 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM2Q8N967 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.16■□□□□ 0.02
LRTM2Q8N967 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM2Q8N967 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM2Q8N967 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM2Q8N967 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.16■□□□□ 0.02
LRTM2Q8N967 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
LRTM2Q8N967 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.16■□□□□ 0.02
LRTM2Q8N967 AC004911.1-201ENST00000416316 871 ntBASIC15.16■□□□□ 0.02
LRTM2Q8N967 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.16■□□□□ 0.02
LRTM2Q8N967 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.16■□□□□ 0.02
LRTM2Q8N967 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.16■□□□□ 0.02
LRTM2Q8N967 PRSS44-201ENST00000515154 1146 ntBASIC15.16■□□□□ 0.02
LRTM2Q8N967 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.16■□□□□ 0.02
LRTM2Q8N967 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM2Q8N967 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.16■□□□□ 0.02
LRTM2Q8N967 AC060766.5-201ENST00000590539 871 ntBASIC15.16■□□□□ 0.02
LRTM2Q8N967 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM2Q8N967 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM2Q8N967 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LRTM2Q8N967 AC012313.1-201ENST00000593393 3059 ntBASIC15.16■□□□□ 0.02
LRTM2Q8N967 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM2Q8N967 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.16■□□□□ 0.02
LRTM2Q8N967 AL096828.2-201ENST00000567259 1965 ntBASIC15.16■□□□□ 0.02
LRTM2Q8N967 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM2Q8N967 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM2Q8N967 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
LRTM2Q8N967 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.16■□□□□ 0.02
LRTM2Q8N967 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM2Q8N967 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM2Q8N967 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM2Q8N967 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM2Q8N967 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.16■□□□□ 0.02
LRTM2Q8N967 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.16■□□□□ 0.02
LRTM2Q8N967 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
LRTM2Q8N967 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LRTM2Q8N967 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.15■□□□□ 0.02
LRTM2Q8N967 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRTM2Q8N967 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRTM2Q8N967 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.15■□□□□ 0.02
LRTM2Q8N967 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRTM2Q8N967 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms