Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.04■□□□□ 0.64
RTL3Q8N8U3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RTL3Q8N8U3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.04■□□□□ 0.64
RTL3Q8N8U3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTL3Q8N8U3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RTL3Q8N8U3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RTL3Q8N8U3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTL3Q8N8U3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RTL3Q8N8U3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.04■□□□□ 0.64
RTL3Q8N8U3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTL3Q8N8U3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTL3Q8N8U3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RTL3Q8N8U3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTL3Q8N8U3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.03■□□□□ 0.64
RTL3Q8N8U3 AC126763.1-201ENST00000552015 2118 ntBASIC19.03■□□□□ 0.64
RTL3Q8N8U3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RTL3Q8N8U3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.03■□□□□ 0.64
RTL3Q8N8U3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTL3Q8N8U3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RTL3Q8N8U3 TMPOP1-202ENST00000424642 1267 ntBASIC19.03■□□□□ 0.64
RTL3Q8N8U3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTL3Q8N8U3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.03■□□□□ 0.64
RTL3Q8N8U3 KRT18P21-201ENST00000515767 1272 ntBASIC19.03■□□□□ 0.64
RTL3Q8N8U3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.03■□□□□ 0.64
RTL3Q8N8U3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.03■□□□□ 0.64
RTL3Q8N8U3 GCSHP2-201ENST00000560971 527 ntBASIC19.03■□□□□ 0.64
RTL3Q8N8U3 AL441883.1-201ENST00000566170 1045 ntBASIC19.03■□□□□ 0.64
RTL3Q8N8U3 MIR3180-4-201ENST00000582223 153 ntBASIC19.03■□□□□ 0.64
RTL3Q8N8U3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
RTL3Q8N8U3 AC011558.1-201ENST00000623459 338 ntBASIC19.03■□□□□ 0.64
RTL3Q8N8U3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTL3Q8N8U3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
RTL3Q8N8U3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.03■□□□□ 0.64
RTL3Q8N8U3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RTL3Q8N8U3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RTL3Q8N8U3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTL3Q8N8U3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.03■□□□□ 0.64
RTL3Q8N8U3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
RTL3Q8N8U3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RTL3Q8N8U3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RTL3Q8N8U3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTL3Q8N8U3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTL3Q8N8U3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTL3Q8N8U3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
RTL3Q8N8U3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.02■□□□□ 0.64
RTL3Q8N8U3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTL3Q8N8U3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.02■□□□□ 0.64
RTL3Q8N8U3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTL3Q8N8U3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTL3Q8N8U3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTL3Q8N8U3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.02■□□□□ 0.64
RTL3Q8N8U3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
RTL3Q8N8U3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.02■□□□□ 0.64
RTL3Q8N8U3 FAM210CP-201ENST00000445714 574 ntBASIC19.02■□□□□ 0.64
RTL3Q8N8U3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.02■□□□□ 0.64
RTL3Q8N8U3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.02■□□□□ 0.64
RTL3Q8N8U3 AC010240.3-201ENST00000607688 395 ntBASIC19.02■□□□□ 0.64
RTL3Q8N8U3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTL3Q8N8U3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RTL3Q8N8U3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTL3Q8N8U3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.02■□□□□ 0.63
RTL3Q8N8U3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
RTL3Q8N8U3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
RTL3Q8N8U3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RTL3Q8N8U3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RTL3Q8N8U3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
RTL3Q8N8U3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.63
RTL3Q8N8U3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
RTL3Q8N8U3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.01■□□□□ 0.63
RTL3Q8N8U3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.01■□□□□ 0.63
RTL3Q8N8U3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.01■□□□□ 0.63
RTL3Q8N8U3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTL3Q8N8U3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTL3Q8N8U3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
RTL3Q8N8U3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.01■□□□□ 0.63
RTL3Q8N8U3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.01■□□□□ 0.63
RTL3Q8N8U3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RTL3Q8N8U3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTL3Q8N8U3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.01■□□□□ 0.63
RTL3Q8N8U3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RTL3Q8N8U3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTL3Q8N8U3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTL3Q8N8U3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RTL3Q8N8U3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTL3Q8N8U3 AC104076.2-201ENST00000448912 469 ntBASIC19.01■□□□□ 0.63
RTL3Q8N8U3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.01■□□□□ 0.63
RTL3Q8N8U3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.01■□□□□ 0.63
RTL3Q8N8U3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.01■□□□□ 0.63
RTL3Q8N8U3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RTL3Q8N8U3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.01■□□□□ 0.63
RTL3Q8N8U3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.01■□□□□ 0.63
RTL3Q8N8U3 AC073592.3-201ENST00000625118 1834 ntBASIC19.01■□□□□ 0.63
RTL3Q8N8U3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTL3Q8N8U3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTL3Q8N8U3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTL3Q8N8U3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.01■□□□□ 0.63
RTL3Q8N8U3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RTL3Q8N8U3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19■□□□□ 0.63
RTL3Q8N8U3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19■□□□□ 0.63
RTL3Q8N8U3 AL163051.1-201ENST00000569214 1512 ntBASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms