Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
PHTF2Q8N3S3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PHTF2Q8N3S3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHTF2Q8N3S3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PHTF2Q8N3S3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.2■□□□□ 0.66
PHTF2Q8N3S3 KRT18P48-201ENST00000434763 852 ntBASIC19.2■□□□□ 0.66
PHTF2Q8N3S3 AC034232.1-201ENST00000506026 1064 ntBASIC19.2■□□□□ 0.66
PHTF2Q8N3S3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHTF2Q8N3S3 KRT126P-201ENST00000549467 1181 ntBASIC19.2■□□□□ 0.66
PHTF2Q8N3S3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PHTF2Q8N3S3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHTF2Q8N3S3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
PHTF2Q8N3S3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHTF2Q8N3S3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHTF2Q8N3S3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PHTF2Q8N3S3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
PHTF2Q8N3S3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHTF2Q8N3S3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHTF2Q8N3S3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
PHTF2Q8N3S3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PHTF2Q8N3S3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHTF2Q8N3S3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PHTF2Q8N3S3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHTF2Q8N3S3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHTF2Q8N3S3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PHTF2Q8N3S3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHTF2Q8N3S3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.19■□□□□ 0.66
PHTF2Q8N3S3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHTF2Q8N3S3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.19■□□□□ 0.66
PHTF2Q8N3S3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHTF2Q8N3S3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHTF2Q8N3S3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PHTF2Q8N3S3 HCG4P8-203ENST00000443049 980 ntBASIC19.19■□□□□ 0.66
PHTF2Q8N3S3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHTF2Q8N3S3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
PHTF2Q8N3S3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PHTF2Q8N3S3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.19■□□□□ 0.66
PHTF2Q8N3S3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.19■□□□□ 0.66
PHTF2Q8N3S3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PHTF2Q8N3S3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHTF2Q8N3S3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHTF2Q8N3S3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PHTF2Q8N3S3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PHTF2Q8N3S3 AC007613.1-201ENST00000572811 2597 ntBASIC19.19■□□□□ 0.66
PHTF2Q8N3S3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PHTF2Q8N3S3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHTF2Q8N3S3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PHTF2Q8N3S3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.19■□□□□ 0.66
PHTF2Q8N3S3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.18■□□□□ 0.66
PHTF2Q8N3S3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PHTF2Q8N3S3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.18■□□□□ 0.66
PHTF2Q8N3S3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.18■□□□□ 0.66
PHTF2Q8N3S3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHTF2Q8N3S3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PHTF2Q8N3S3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHTF2Q8N3S3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHTF2Q8N3S3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHTF2Q8N3S3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHTF2Q8N3S3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PHTF2Q8N3S3 ATP5G2P1-201ENST00000433580 426 ntBASIC19.18■□□□□ 0.66
PHTF2Q8N3S3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.18■□□□□ 0.66
PHTF2Q8N3S3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.18■□□□□ 0.66
PHTF2Q8N3S3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.18■□□□□ 0.66
PHTF2Q8N3S3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.18■□□□□ 0.66
PHTF2Q8N3S3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PHTF2Q8N3S3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.18■□□□□ 0.66
PHTF2Q8N3S3 NPAP1P7-201ENST00000613027 823 ntBASIC19.18■□□□□ 0.66
PHTF2Q8N3S3 AC079602.3-201ENST00000623931 403 ntBASIC19.18■□□□□ 0.66
PHTF2Q8N3S3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHTF2Q8N3S3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.18■□□□□ 0.66
PHTF2Q8N3S3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PHTF2Q8N3S3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHTF2Q8N3S3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHTF2Q8N3S3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PHTF2Q8N3S3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHTF2Q8N3S3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHTF2Q8N3S3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.17■□□□□ 0.66
PHTF2Q8N3S3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PHTF2Q8N3S3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHTF2Q8N3S3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHTF2Q8N3S3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.17■□□□□ 0.66
PHTF2Q8N3S3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PHTF2Q8N3S3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PHTF2Q8N3S3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PHTF2Q8N3S3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHTF2Q8N3S3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHTF2Q8N3S3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHTF2Q8N3S3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PHTF2Q8N3S3 AL645929.1-201ENST00000420084 975 ntBASIC19.17■□□□□ 0.66
PHTF2Q8N3S3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.17■□□□□ 0.66
PHTF2Q8N3S3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHTF2Q8N3S3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.17■□□□□ 0.66
PHTF2Q8N3S3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHTF2Q8N3S3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHTF2Q8N3S3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHTF2Q8N3S3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHTF2Q8N3S3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.17■□□□□ 0.66
PHTF2Q8N3S3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHTF2Q8N3S3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHTF2Q8N3S3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms