Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC28.96■■■□□ 2.23
VPS8Q8N3P4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
VPS8Q8N3P4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
VPS8Q8N3P4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC28.95■■■□□ 2.23
VPS8Q8N3P4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC28.95■■■□□ 2.23
VPS8Q8N3P4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC28.95■■■□□ 2.23
VPS8Q8N3P4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC28.95■■■□□ 2.23
VPS8Q8N3P4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC28.95■■■□□ 2.23
VPS8Q8N3P4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC28.95■■■□□ 2.23
VPS8Q8N3P4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
VPS8Q8N3P4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
VPS8Q8N3P4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC28.95■■■□□ 2.23
VPS8Q8N3P4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
VPS8Q8N3P4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
VPS8Q8N3P4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
VPS8Q8N3P4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC28.95■■■□□ 2.22
VPS8Q8N3P4 AC099343.3-201ENST00000605834 2503 ntBASIC28.95■■■□□ 2.22
VPS8Q8N3P4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
VPS8Q8N3P4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
VPS8Q8N3P4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
VPS8Q8N3P4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
VPS8Q8N3P4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
VPS8Q8N3P4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
VPS8Q8N3P4 HES2-202ENST00000377836 507 ntTSL 2 BASIC28.94■■■□□ 2.22
VPS8Q8N3P4 AP002383.4-201ENST00000442518 975 ntBASIC28.94■■■□□ 2.22
VPS8Q8N3P4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC28.94■■■□□ 2.22
VPS8Q8N3P4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC28.94■■■□□ 2.22
VPS8Q8N3P4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC28.94■■■□□ 2.22
VPS8Q8N3P4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC28.94■■■□□ 2.22
VPS8Q8N3P4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC28.94■■■□□ 2.22
VPS8Q8N3P4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC28.94■■■□□ 2.22
VPS8Q8N3P4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC28.94■■■□□ 2.22
VPS8Q8N3P4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC28.94■■■□□ 2.22
VPS8Q8N3P4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC28.94■■■□□ 2.22
VPS8Q8N3P4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC28.94■■■□□ 2.22
VPS8Q8N3P4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC28.94■■■□□ 2.22
VPS8Q8N3P4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
VPS8Q8N3P4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
VPS8Q8N3P4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC28.94■■■□□ 2.22
VPS8Q8N3P4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC28.94■■■□□ 2.22
VPS8Q8N3P4 AC016734.2-201ENST00000624325 1377 ntBASIC28.94■■■□□ 2.22
VPS8Q8N3P4 Z83836.1-201ENST00000624605 1642 ntBASIC28.94■■■□□ 2.22
VPS8Q8N3P4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
VPS8Q8N3P4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
VPS8Q8N3P4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC28.94■■■□□ 2.22
VPS8Q8N3P4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
VPS8Q8N3P4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC28.93■■■□□ 2.22
VPS8Q8N3P4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
VPS8Q8N3P4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC28.93■■■□□ 2.22
VPS8Q8N3P4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
VPS8Q8N3P4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
VPS8Q8N3P4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
VPS8Q8N3P4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
VPS8Q8N3P4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
VPS8Q8N3P4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
VPS8Q8N3P4 AC073592.3-201ENST00000625118 1834 ntBASIC28.93■■■□□ 2.22
VPS8Q8N3P4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC28.93■■■□□ 2.22
VPS8Q8N3P4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
VPS8Q8N3P4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC28.93■■■□□ 2.22
VPS8Q8N3P4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC28.93■■■□□ 2.22
VPS8Q8N3P4 AC113404.2-201ENST00000507884 177 ntBASIC28.93■■■□□ 2.22
VPS8Q8N3P4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC28.93■■■□□ 2.22
VPS8Q8N3P4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC28.93■■■□□ 2.22
VPS8Q8N3P4 KRT8P26-201ENST00000534154 1276 ntBASIC28.93■■■□□ 2.22
VPS8Q8N3P4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC28.93■■■□□ 2.22
VPS8Q8N3P4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC28.93■■■□□ 2.22
VPS8Q8N3P4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC28.93■■■□□ 2.22
VPS8Q8N3P4 MIR3180-1-201ENST00000580374 94 ntBASIC28.93■■■□□ 2.22
VPS8Q8N3P4 MIR3180-3-201ENST00000584616 94 ntBASIC28.93■■■□□ 2.22
VPS8Q8N3P4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
VPS8Q8N3P4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC28.92■■■□□ 2.22
VPS8Q8N3P4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
VPS8Q8N3P4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC28.92■■■□□ 2.22
VPS8Q8N3P4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
VPS8Q8N3P4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
VPS8Q8N3P4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
VPS8Q8N3P4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC28.92■■■□□ 2.22
VPS8Q8N3P4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC28.92■■■□□ 2.22
VPS8Q8N3P4 KRT18P48-201ENST00000434763 852 ntBASIC28.92■■■□□ 2.22
VPS8Q8N3P4 AP003733.1-201ENST00000491725 852 ntBASIC28.92■■■□□ 2.22
VPS8Q8N3P4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
VPS8Q8N3P4 AC093458.2-201ENST00000623150 629 ntBASIC28.92■■■□□ 2.22
VPS8Q8N3P4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC28.92■■■□□ 2.22
VPS8Q8N3P4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC28.92■■■□□ 2.22
VPS8Q8N3P4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
VPS8Q8N3P4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
VPS8Q8N3P4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
VPS8Q8N3P4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
VPS8Q8N3P4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
VPS8Q8N3P4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC28.91■■■□□ 2.22
VPS8Q8N3P4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
VPS8Q8N3P4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
VPS8Q8N3P4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
VPS8Q8N3P4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC28.91■■■□□ 2.22
VPS8Q8N3P4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC28.91■■■□□ 2.22
VPS8Q8N3P4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
VPS8Q8N3P4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
VPS8Q8N3P4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC28.91■■■□□ 2.22
VPS8Q8N3P4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC28.91■■■□□ 2.22
VPS8Q8N3P4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC28.9■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms