Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCML4Q8N228 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCML4Q8N228 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCML4Q8N228 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.29■□□□□ 0.68
SCML4Q8N228 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCML4Q8N228 SDHAP2-201ENST00000455183 2001 ntBASIC19.29■□□□□ 0.68
SCML4Q8N228 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SCML4Q8N228 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCML4Q8N228 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SCML4Q8N228 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.28■□□□□ 0.68
SCML4Q8N228 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.28■□□□□ 0.68
SCML4Q8N228 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SCML4Q8N228 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.28■□□□□ 0.68
SCML4Q8N228 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCML4Q8N228 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCML4Q8N228 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.28■□□□□ 0.68
SCML4Q8N228 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.28■□□□□ 0.68
SCML4Q8N228 SPDYE13P-201ENST00000445314 798 ntBASIC19.28■□□□□ 0.68
SCML4Q8N228 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.28■□□□□ 0.68
SCML4Q8N228 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SCML4Q8N228 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.28■□□□□ 0.68
SCML4Q8N228 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCML4Q8N228 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.28■□□□□ 0.68
SCML4Q8N228 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.28■□□□□ 0.68
SCML4Q8N228 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.28■□□□□ 0.68
SCML4Q8N228 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCML4Q8N228 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SCML4Q8N228 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.28■□□□□ 0.68
SCML4Q8N228 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SCML4Q8N228 KRT89P-201ENST00000620027 1478 ntBASIC19.28■□□□□ 0.68
SCML4Q8N228 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SCML4Q8N228 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCML4Q8N228 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SCML4Q8N228 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SCML4Q8N228 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCML4Q8N228 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCML4Q8N228 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCML4Q8N228 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCML4Q8N228 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.27■□□□□ 0.68
SCML4Q8N228 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SCML4Q8N228 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCML4Q8N228 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SCML4Q8N228 MIR662-201ENST00000384847 95 ntBASIC19.27■□□□□ 0.68
SCML4Q8N228 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCML4Q8N228 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SCML4Q8N228 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCML4Q8N228 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.27■□□□□ 0.68
SCML4Q8N228 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.27■□□□□ 0.68
SCML4Q8N228 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SCML4Q8N228 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SCML4Q8N228 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
SCML4Q8N228 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.27■□□□□ 0.67
SCML4Q8N228 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SCML4Q8N228 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SCML4Q8N228 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
SCML4Q8N228 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCML4Q8N228 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCML4Q8N228 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCML4Q8N228 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCML4Q8N228 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.26■□□□□ 0.67
SCML4Q8N228 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCML4Q8N228 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.26■□□□□ 0.67
SCML4Q8N228 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCML4Q8N228 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCML4Q8N228 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.26■□□□□ 0.67
SCML4Q8N228 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCML4Q8N228 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCML4Q8N228 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCML4Q8N228 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCML4Q8N228 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.26■□□□□ 0.67
SCML4Q8N228 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.26■□□□□ 0.67
SCML4Q8N228 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCML4Q8N228 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.26■□□□□ 0.67
SCML4Q8N228 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCML4Q8N228 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.26■□□□□ 0.67
SCML4Q8N228 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCML4Q8N228 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.26■□□□□ 0.67
SCML4Q8N228 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCML4Q8N228 AL020996.1-203ENST00000536896 2307 ntBASIC19.25■□□□□ 0.67
SCML4Q8N228 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCML4Q8N228 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCML4Q8N228 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCML4Q8N228 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCML4Q8N228 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.25■□□□□ 0.67
SCML4Q8N228 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SCML4Q8N228 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCML4Q8N228 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCML4Q8N228 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCML4Q8N228 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCML4Q8N228 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCML4Q8N228 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCML4Q8N228 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCML4Q8N228 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCML4Q8N228 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCML4Q8N228 FAM86EP-206ENST00000510506 987 ntBASIC19.25■□□□□ 0.67
SCML4Q8N228 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.25■□□□□ 0.67
SCML4Q8N228 AC087388.1-201ENST00000571370 1112 ntBASIC19.25■□□□□ 0.67
SCML4Q8N228 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCML4Q8N228 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCML4Q8N228 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms