Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NPAS4Q8IUM7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.9■□□□□ 0.78
NPAS4Q8IUM7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.9■□□□□ 0.78
NPAS4Q8IUM7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NPAS4Q8IUM7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NPAS4Q8IUM7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPAS4Q8IUM7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NPAS4Q8IUM7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPAS4Q8IUM7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NPAS4Q8IUM7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
NPAS4Q8IUM7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NPAS4Q8IUM7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NPAS4Q8IUM7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPAS4Q8IUM7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPAS4Q8IUM7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.9■□□□□ 0.78
NPAS4Q8IUM7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPAS4Q8IUM7 AIRN-201ENST00000601203 4374 ntBASIC19.9■□□□□ 0.78
NPAS4Q8IUM7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
NPAS4Q8IUM7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
NPAS4Q8IUM7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NPAS4Q8IUM7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPAS4Q8IUM7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
NPAS4Q8IUM7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPAS4Q8IUM7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPAS4Q8IUM7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.89■□□□□ 0.77
NPAS4Q8IUM7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPAS4Q8IUM7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.89■□□□□ 0.77
NPAS4Q8IUM7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.89■□□□□ 0.77
NPAS4Q8IUM7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPAS4Q8IUM7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
NPAS4Q8IUM7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPAS4Q8IUM7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
NPAS4Q8IUM7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPAS4Q8IUM7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.89■□□□□ 0.77
NPAS4Q8IUM7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPAS4Q8IUM7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 AL163051.1-201ENST00000569214 1512 ntBASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 POM121L3P-201ENST00000419331 1163 ntBASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 AC004263.2-201ENST00000617183 678 ntBASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.88■□□□□ 0.77
NPAS4Q8IUM7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 HLA-A-201ENST00000376802 1334 ntBASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 AC023511.2-201ENST00000618803 211 ntBASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms