Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 KSR1P1-201ENST00000446298 240 ntBASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 AC233702.5-201ENST00000584107 538 ntBASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 AC073195.1-201ENST00000607241 877 ntBASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 AC066615.1-201ENST00000640911 628 ntBASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF111Q6ZNA4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF111Q6ZNA4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF111Q6ZNA4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF111Q6ZNA4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF111Q6ZNA4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF111Q6ZNA4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF111Q6ZNA4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RNF111Q6ZNA4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF111Q6ZNA4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF111Q6ZNA4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF111Q6ZNA4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF111Q6ZNA4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
RNF111Q6ZNA4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RNF111Q6ZNA4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF111Q6ZNA4 RPS2P4-201ENST00000476944 856 ntBASIC18.04■□□□□ 0.48
RNF111Q6ZNA4 AC093827.2-201ENST00000512654 315 ntBASIC18.04■□□□□ 0.48
RNF111Q6ZNA4 Z99916.2-201ENST00000604037 246 ntBASIC18.04■□□□□ 0.48
RNF111Q6ZNA4 HLA-A-209ENST00000638375 975 ntBASIC18.04■□□□□ 0.48
RNF111Q6ZNA4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF111Q6ZNA4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF111Q6ZNA4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF111Q6ZNA4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RNF111Q6ZNA4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF111Q6ZNA4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.04■□□□□ 0.48
RNF111Q6ZNA4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF111Q6ZNA4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RNF111Q6ZNA4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RNF111Q6ZNA4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF111Q6ZNA4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF111Q6ZNA4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF111Q6ZNA4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF111Q6ZNA4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF111Q6ZNA4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF111Q6ZNA4 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.03■□□□□ 0.48
RNF111Q6ZNA4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF111Q6ZNA4 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.03■□□□□ 0.48
RNF111Q6ZNA4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF111Q6ZNA4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF111Q6ZNA4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF111Q6ZNA4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RNF111Q6ZNA4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.03■□□□□ 0.48
RNF111Q6ZNA4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.03■□□□□ 0.48
RNF111Q6ZNA4 AL445675.2-201ENST00000620291 557 ntBASIC18.03■□□□□ 0.48
RNF111Q6ZNA4 AL049637.2-201ENST00000641778 930 ntBASIC18.03■□□□□ 0.48
RNF111Q6ZNA4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF111Q6ZNA4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms