Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
LRFN4Q6PJG9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
LRFN4Q6PJG9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 AP000997.3-201ENST00000623333 2250 ntBASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 DGCR10-201ENST00000609839 495 ntBASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 AC096733.2-201ENST00000609937 1394 ntBASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 Z98044.1-201ENST00000632503 1764 ntBASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRFN4Q6PJG9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 PKD1P1-201ENST00000458669 6805 ntBASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 AC097488.1-201ENST00000507834 756 ntBASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 SLC25A1P4-201ENST00000567977 778 ntBASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.73■□□□□ 0.27
LRFN4Q6PJG9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 KRT8P3-201ENST00000519669 1449 ntBASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 AL031598.1-201ENST00000561511 1773 ntBASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 OR6D1P-202ENST00000641007 5290 ntBASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 SNORA78-201ENST00000459373 127 ntBASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 AC083906.6-201ENST00000641366 219 ntBASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 PCDHB18P-201ENST00000524813 2368 ntBASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
LRFN4Q6PJG9 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms