Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LPCAT4Q643R3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.52■□□□□ 0.4
LPCAT4Q643R3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.52■□□□□ 0.4
LPCAT4Q643R3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LPCAT4Q643R3 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.52■□□□□ 0.4
LPCAT4Q643R3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LPCAT4Q643R3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LPCAT4Q643R3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.52■□□□□ 0.4
LPCAT4Q643R3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
LPCAT4Q643R3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
LPCAT4Q643R3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LPCAT4Q643R3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LPCAT4Q643R3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LPCAT4Q643R3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.52■□□□□ 0.4
LPCAT4Q643R3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LPCAT4Q643R3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LPCAT4Q643R3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LPCAT4Q643R3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LPCAT4Q643R3 AC007322.4-201ENST00000509611 723 ntBASIC17.52■□□□□ 0.4
LPCAT4Q643R3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.52■□□□□ 0.4
LPCAT4Q643R3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LPCAT4Q643R3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.52■□□□□ 0.4
LPCAT4Q643R3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LPCAT4Q643R3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LPCAT4Q643R3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
LPCAT4Q643R3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
LPCAT4Q643R3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LPCAT4Q643R3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
LPCAT4Q643R3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.52■□□□□ 0.39
LPCAT4Q643R3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LPCAT4Q643R3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.39
LPCAT4Q643R3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.52■□□□□ 0.39
LPCAT4Q643R3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
LPCAT4Q643R3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT4Q643R3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LPCAT4Q643R3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT4Q643R3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT4Q643R3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.51■□□□□ 0.39
LPCAT4Q643R3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT4Q643R3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT4Q643R3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LPCAT4Q643R3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
LPCAT4Q643R3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.51■□□□□ 0.39
LPCAT4Q643R3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT4Q643R3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.51■□□□□ 0.39
LPCAT4Q643R3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT4Q643R3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT4Q643R3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.51■□□□□ 0.39
LPCAT4Q643R3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT4Q643R3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.51■□□□□ 0.39
LPCAT4Q643R3 PKD1P1-201ENST00000458669 6805 ntBASIC17.51■□□□□ 0.39
LPCAT4Q643R3 FLJ13224-201ENST00000313737 1514 ntBASIC17.51■□□□□ 0.39
LPCAT4Q643R3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT4Q643R3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT4Q643R3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT4Q643R3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT4Q643R3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LPCAT4Q643R3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 AC005837.3-201ENST00000612163 286 ntBASIC17.5■□□□□ 0.39
LPCAT4Q643R3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 PCDH8P1-201ENST00000428983 2773 ntBASIC17.5■□□□□ 0.39
LPCAT4Q643R3 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.5■□□□□ 0.39
LPCAT4Q643R3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
LPCAT4Q643R3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LPCAT4Q643R3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LPCAT4Q643R3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LPCAT4Q643R3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.49■□□□□ 0.39
LPCAT4Q643R3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms