Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RIF1Q5UIP0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RIF1Q5UIP0 GAPDHP21-201ENST00000450301 1010 ntBASIC17.98■□□□□ 0.47
RIF1Q5UIP0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.98■□□□□ 0.47
RIF1Q5UIP0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.98■□□□□ 0.47
RIF1Q5UIP0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.98■□□□□ 0.47
RIF1Q5UIP0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RIF1Q5UIP0 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.98■□□□□ 0.47
RIF1Q5UIP0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RIF1Q5UIP0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.98■□□□□ 0.47
RIF1Q5UIP0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RIF1Q5UIP0 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.98■□□□□ 0.47
RIF1Q5UIP0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RIF1Q5UIP0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
RIF1Q5UIP0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RIF1Q5UIP0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.98■□□□□ 0.47
RIF1Q5UIP0 AC133561.1-201ENST00000568600 2415 ntBASIC17.98■□□□□ 0.47
RIF1Q5UIP0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RIF1Q5UIP0 LAGE3P1-201ENST00000425356 484 ntBASIC17.98■□□□□ 0.47
RIF1Q5UIP0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.98■□□□□ 0.47
RIF1Q5UIP0 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.98■□□□□ 0.47
RIF1Q5UIP0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
RIF1Q5UIP0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RIF1Q5UIP0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.98■□□□□ 0.47
RIF1Q5UIP0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RIF1Q5UIP0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RIF1Q5UIP0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RIF1Q5UIP0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RIF1Q5UIP0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RIF1Q5UIP0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RIF1Q5UIP0 ELL2P1-201ENST00000413990 1906 ntBASIC17.97■□□□□ 0.47
RIF1Q5UIP0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RIF1Q5UIP0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RIF1Q5UIP0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.97■□□□□ 0.47
RIF1Q5UIP0 AC108751.1-201ENST00000490852 363 ntBASIC17.97■□□□□ 0.47
RIF1Q5UIP0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.97■□□□□ 0.47
RIF1Q5UIP0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.97■□□□□ 0.47
RIF1Q5UIP0 AL513190.1-201ENST00000621254 727 ntBASIC17.97■□□□□ 0.47
RIF1Q5UIP0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RIF1Q5UIP0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RIF1Q5UIP0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RIF1Q5UIP0 SDHAP1-207ENST00000440850 2000 ntBASIC17.97■□□□□ 0.47
RIF1Q5UIP0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RIF1Q5UIP0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.97■□□□□ 0.47
RIF1Q5UIP0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RIF1Q5UIP0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.97■□□□□ 0.47
RIF1Q5UIP0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
RIF1Q5UIP0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.97■□□□□ 0.47
RIF1Q5UIP0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.97■□□□□ 0.47
RIF1Q5UIP0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RIF1Q5UIP0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RIF1Q5UIP0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RIF1Q5UIP0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.96■□□□□ 0.47
RIF1Q5UIP0 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RIF1Q5UIP0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.96■□□□□ 0.47
RIF1Q5UIP0 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.96■□□□□ 0.47
RIF1Q5UIP0 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RIF1Q5UIP0 NKAPP1-205ENST00000585790 367 ntBASIC17.96■□□□□ 0.47
RIF1Q5UIP0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RIF1Q5UIP0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RIF1Q5UIP0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RIF1Q5UIP0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RIF1Q5UIP0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
RIF1Q5UIP0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.96■□□□□ 0.47
RIF1Q5UIP0 MRPL20P1-201ENST00000400819 433 ntBASIC17.96■□□□□ 0.47
RIF1Q5UIP0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.96■□□□□ 0.47
RIF1Q5UIP0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.96■□□□□ 0.47
RIF1Q5UIP0 SIGLEC30P-201ENST00000455569 941 ntBASIC17.96■□□□□ 0.47
RIF1Q5UIP0 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RIF1Q5UIP0 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RIF1Q5UIP0 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.96■□□□□ 0.47
RIF1Q5UIP0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RIF1Q5UIP0 AP005212.1-201ENST00000581547 1997 ntBASIC17.96■□□□□ 0.46
RIF1Q5UIP0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RIF1Q5UIP0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RIF1Q5UIP0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.95■□□□□ 0.46
RIF1Q5UIP0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RIF1Q5UIP0 AC018845.2-201ENST00000568326 409 ntBASIC17.95■□□□□ 0.46
RIF1Q5UIP0 MIR4745-201ENST00000577608 62 ntBASIC17.95■□□□□ 0.46
RIF1Q5UIP0 AL138831.2-201ENST00000606564 490 ntBASIC17.95■□□□□ 0.46
RIF1Q5UIP0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.95■□□□□ 0.46
RIF1Q5UIP0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RIF1Q5UIP0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RIF1Q5UIP0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.95■□□□□ 0.46
RIF1Q5UIP0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RIF1Q5UIP0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RIF1Q5UIP0 AP002414.3-201ENST00000589352 1468 ntBASIC17.95■□□□□ 0.46
RIF1Q5UIP0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RIF1Q5UIP0 AC097374.2-201ENST00000618617 1306 ntBASIC17.95■□□□□ 0.46
RIF1Q5UIP0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RIF1Q5UIP0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.95■□□□□ 0.46
RIF1Q5UIP0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RIF1Q5UIP0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RIF1Q5UIP0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RIF1Q5UIP0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.95■□□□□ 0.46
RIF1Q5UIP0 AC004449.1-201ENST00000564240 433 ntBASIC17.95■□□□□ 0.46
RIF1Q5UIP0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RIF1Q5UIP0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RIF1Q5UIP0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RIF1Q5UIP0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms