Protein–RNA interactions for Protein: Q587I9

SFT2D3, Vesicle transport protein SFT2C, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D3Q587I9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
SFT2D3Q587I9 BX088651.1-201ENST00000540551 451 ntBASIC18.17■□□□□ 0.5
SFT2D3Q587I9 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.17■□□□□ 0.5
SFT2D3Q587I9 REXO1L10P-201ENST00000615707 1290 ntBASIC18.17■□□□□ 0.5
SFT2D3Q587I9 REXO1L12P-201ENST00000622156 912 ntBASIC18.17■□□□□ 0.5
SFT2D3Q587I9 AC131212.4-201ENST00000623606 975 ntBASIC18.17■□□□□ 0.5
SFT2D3Q587I9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SFT2D3Q587I9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SFT2D3Q587I9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.17■□□□□ 0.5
SFT2D3Q587I9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SFT2D3Q587I9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SFT2D3Q587I9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SFT2D3Q587I9 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SFT2D3Q587I9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SFT2D3Q587I9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SFT2D3Q587I9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SFT2D3Q587I9 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SFT2D3Q587I9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SFT2D3Q587I9 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SFT2D3Q587I9 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
SFT2D3Q587I9 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
SFT2D3Q587I9 ESPNP-201ENST00000270691 2015 ntBASIC18.16■□□□□ 0.5
SFT2D3Q587I9 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SFT2D3Q587I9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.16■□□□□ 0.5
SFT2D3Q587I9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.16■□□□□ 0.5
SFT2D3Q587I9 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SFT2D3Q587I9 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SFT2D3Q587I9 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.16■□□□□ 0.5
SFT2D3Q587I9 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SFT2D3Q587I9 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SFT2D3Q587I9 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.16■□□□□ 0.5
SFT2D3Q587I9 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SFT2D3Q587I9 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SFT2D3Q587I9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SFT2D3Q587I9 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SFT2D3Q587I9 AC073912.3-201ENST00000624414 853 ntBASIC18.16■□□□□ 0.5
SFT2D3Q587I9 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.16■□□□□ 0.5
SFT2D3Q587I9 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SFT2D3Q587I9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SFT2D3Q587I9 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SFT2D3Q587I9 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SFT2D3Q587I9 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SFT2D3Q587I9 TNRC18P3-201ENST00000441896 2691 ntBASIC18.16■□□□□ 0.5
SFT2D3Q587I9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 AC004980.1-204ENST00000429707 299 ntBASIC18.15■□□□□ 0.5
SFT2D3Q587I9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 PCDHA12-202ENST00000613593 2588 ntBASIC18.15■□□□□ 0.5
SFT2D3Q587I9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SFT2D3Q587I9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
SFT2D3Q587I9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SFT2D3Q587I9 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SFT2D3Q587I9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SFT2D3Q587I9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.14■□□□□ 0.49
SFT2D3Q587I9 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SFT2D3Q587I9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SFT2D3Q587I9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.14■□□□□ 0.49
SFT2D3Q587I9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SFT2D3Q587I9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SFT2D3Q587I9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SFT2D3Q587I9 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.14■□□□□ 0.49
SFT2D3Q587I9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.14■□□□□ 0.49
SFT2D3Q587I9 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SFT2D3Q587I9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.14■□□□□ 0.49
SFT2D3Q587I9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.14■□□□□ 0.49
SFT2D3Q587I9 AC116562.2-201ENST00000507042 360 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms