Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.48■□□□□ 0.23
PCGF3Q3KNV8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.48■□□□□ 0.23
PCGF3Q3KNV8 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.48■□□□□ 0.23
PCGF3Q3KNV8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.48■□□□□ 0.23
PCGF3Q3KNV8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.48■□□□□ 0.23
PCGF3Q3KNV8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.48■□□□□ 0.23
PCGF3Q3KNV8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
PCGF3Q3KNV8 BX088651.1-201ENST00000540551 451 ntBASIC16.48■□□□□ 0.23
PCGF3Q3KNV8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.48■□□□□ 0.23
PCGF3Q3KNV8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
PCGF3Q3KNV8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PCGF3Q3KNV8 HLA-A-209ENST00000638375 975 ntBASIC16.48■□□□□ 0.23
PCGF3Q3KNV8 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCGF3Q3KNV8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.48■□□□□ 0.23
PCGF3Q3KNV8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.48■□□□□ 0.23
PCGF3Q3KNV8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCGF3Q3KNV8 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PCGF3Q3KNV8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCGF3Q3KNV8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.48■□□□□ 0.23
PCGF3Q3KNV8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCGF3Q3KNV8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PCGF3Q3KNV8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.48■□□□□ 0.23
PCGF3Q3KNV8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PCGF3Q3KNV8 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCGF3Q3KNV8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 AC004980.1-204ENST00000429707 299 ntBASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 AL355075.4-201ENST00000554988 638 ntBASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 REXO1L10P-201ENST00000615707 1290 ntBASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 REXO1L12P-201ENST00000622156 912 ntBASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 AL512353.2-201ENST00000448759 1962 ntBASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCGF3Q3KNV8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 DGCR10-201ENST00000609839 495 ntBASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 MIR6786-201ENST00000616843 113 ntBASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PCGF3Q3KNV8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
PCGF3Q3KNV8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.45■□□□□ 0.22
PCGF3Q3KNV8 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCGF3Q3KNV8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms