Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.06■□□□□ 0.48
CACNA1EQ15878 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CACNA1EQ15878 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.06■□□□□ 0.48
CACNA1EQ15878 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CACNA1EQ15878 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CACNA1EQ15878 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CACNA1EQ15878 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
CACNA1EQ15878 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CACNA1EQ15878 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.06■□□□□ 0.48
CACNA1EQ15878 TERC-201ENST00000602385 541 ntBASIC18.06■□□□□ 0.48
CACNA1EQ15878 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.06■□□□□ 0.48
CACNA1EQ15878 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CACNA1EQ15878 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CACNA1EQ15878 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNA1EQ15878 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.05■□□□□ 0.48
CACNA1EQ15878 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.05■□□□□ 0.48
CACNA1EQ15878 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNA1EQ15878 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CACNA1EQ15878 POM121L3P-201ENST00000419331 1163 ntBASIC18.05■□□□□ 0.48
CACNA1EQ15878 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNA1EQ15878 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.05■□□□□ 0.48
CACNA1EQ15878 MIR7706-201ENST00000613747 67 ntBASIC18.05■□□□□ 0.48
CACNA1EQ15878 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.05■□□□□ 0.48
CACNA1EQ15878 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.05■□□□□ 0.48
CACNA1EQ15878 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CACNA1EQ15878 AC022898.2-201ENST00000616822 1312 ntBASIC18.05■□□□□ 0.48
CACNA1EQ15878 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CACNA1EQ15878 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNA1EQ15878 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.05■□□□□ 0.48
CACNA1EQ15878 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CACNA1EQ15878 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNA1EQ15878 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.05■□□□□ 0.48
CACNA1EQ15878 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNA1EQ15878 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
CACNA1EQ15878 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNA1EQ15878 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.05■□□□□ 0.48
CACNA1EQ15878 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.05■□□□□ 0.48
CACNA1EQ15878 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CACNA1EQ15878 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.05■□□□□ 0.48
CACNA1EQ15878 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CACNA1EQ15878 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.05■□□□□ 0.48
CACNA1EQ15878 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.05■□□□□ 0.48
CACNA1EQ15878 AC008608.2-201ENST00000606089 416 ntBASIC18.05■□□□□ 0.48
CACNA1EQ15878 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.05■□□□□ 0.48
CACNA1EQ15878 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CACNA1EQ15878 LINC01521-201ENST00000504184 1943 ntBASIC18.04■□□□□ 0.48
CACNA1EQ15878 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.04■□□□□ 0.48
CACNA1EQ15878 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1EQ15878 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1EQ15878 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CACNA1EQ15878 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1EQ15878 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.04■□□□□ 0.48
CACNA1EQ15878 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.04■□□□□ 0.48
CACNA1EQ15878 AC073648.2-201ENST00000510116 352 ntBASIC18.04■□□□□ 0.48
CACNA1EQ15878 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.04■□□□□ 0.48
CACNA1EQ15878 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CACNA1EQ15878 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1EQ15878 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1EQ15878 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1EQ15878 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1EQ15878 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1EQ15878 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1EQ15878 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.04■□□□□ 0.48
CACNA1EQ15878 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1EQ15878 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1EQ15878 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.04■□□□□ 0.48
CACNA1EQ15878 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1EQ15878 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.04■□□□□ 0.48
CACNA1EQ15878 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.04■□□□□ 0.48
CACNA1EQ15878 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1EQ15878 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.04■□□□□ 0.48
CACNA1EQ15878 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1EQ15878 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CACNA1EQ15878 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.03■□□□□ 0.48
CACNA1EQ15878 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CACNA1EQ15878 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.03■□□□□ 0.48
CACNA1EQ15878 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CACNA1EQ15878 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CACNA1EQ15878 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CACNA1EQ15878 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CACNA1EQ15878 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.03■□□□□ 0.48
CACNA1EQ15878 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CACNA1EQ15878 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.03■□□□□ 0.48
CACNA1EQ15878 AC096582.2-201ENST00000510860 516 ntBASIC18.03■□□□□ 0.48
CACNA1EQ15878 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.03■□□□□ 0.48
CACNA1EQ15878 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.03■□□□□ 0.48
CACNA1EQ15878 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CACNA1EQ15878 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CACNA1EQ15878 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CACNA1EQ15878 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
CACNA1EQ15878 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CACNA1EQ15878 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CACNA1EQ15878 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CACNA1EQ15878 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CACNA1EQ15878 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CACNA1EQ15878 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CACNA1EQ15878 RNPS1P1-201ENST00000507437 918 ntBASIC18.03■□□□□ 0.48
CACNA1EQ15878 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.03■□□□□ 0.48
CACNA1EQ15878 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.03■□□□□ 0.48
CACNA1EQ15878 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms