Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SYCNQ0VAF6 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 KRT8P32-201ENST00000512863 1461 ntBASIC12.3□□□□□ -0.44
SYCNQ0VAF6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 RPS2P55-201ENST00000397318 883 ntBASIC12.3□□□□□ -0.44
SYCNQ0VAF6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 AC012618.2-201ENST00000428058 849 ntBASIC12.3□□□□□ -0.44
SYCNQ0VAF6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 AL355355.2-201ENST00000442321 338 ntBASIC12.3□□□□□ -0.44
SYCNQ0VAF6 AC107956.1-201ENST00000494359 873 ntBASIC12.3□□□□□ -0.44
SYCNQ0VAF6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 SLC25A1P4-201ENST00000567977 778 ntBASIC12.3□□□□□ -0.44
SYCNQ0VAF6 CYGB-204ENST00000589342 815 ntTSL 3 BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 AP000692.2-201ENST00000608391 879 ntBASIC12.3□□□□□ -0.44
SYCNQ0VAF6 DGCR10-201ENST00000609839 495 ntBASIC12.3□□□□□ -0.44
SYCNQ0VAF6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 AC068587.9-201ENST00000641814 219 ntBASIC12.3□□□□□ -0.44
SYCNQ0VAF6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC12.3□□□□□ -0.44
SYCNQ0VAF6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC12.29□□□□□ -0.44
SYCNQ0VAF6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC12.29□□□□□ -0.44
SYCNQ0VAF6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SYCNQ0VAF6 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SYCNQ0VAF6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SYCNQ0VAF6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SYCNQ0VAF6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
SYCNQ0VAF6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SYCNQ0VAF6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SYCNQ0VAF6 AC005082.1-201ENST00000413042 2259 ntBASIC12.29□□□□□ -0.44
SYCNQ0VAF6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SYCNQ0VAF6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SYCNQ0VAF6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SYCNQ0VAF6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC12.29□□□□□ -0.44
SYCNQ0VAF6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SYCNQ0VAF6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SYCNQ0VAF6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SYCNQ0VAF6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SYCNQ0VAF6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SYCNQ0VAF6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC12.29□□□□□ -0.44
SYCNQ0VAF6 AC008040.2-201ENST00000461049 708 ntBASIC12.29□□□□□ -0.44
SYCNQ0VAF6 AC098590.1-201ENST00000468126 897 ntBASIC12.29□□□□□ -0.44
SYCNQ0VAF6 NUDT16P1-203ENST00000513809 620 ntBASIC12.29□□□□□ -0.44
SYCNQ0VAF6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC12.29□□□□□ -0.44
SYCNQ0VAF6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC12.29□□□□□ -0.44
SYCNQ0VAF6 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SYCNQ0VAF6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SYCNQ0VAF6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms