Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
SRPXP78539 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRPXP78539 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.33■□□□□ 0.04
SRPXP78539 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.33■□□□□ 0.04
SRPXP78539 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRPXP78539 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRPXP78539 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.33■□□□□ 0.04
SRPXP78539 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRPXP78539 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SRPXP78539 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
SRPXP78539 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRPXP78539 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRPXP78539 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
SRPXP78539 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.32■□□□□ 0.04
SRPXP78539 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SRPXP78539 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRPXP78539 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SRPXP78539 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRPXP78539 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.32■□□□□ 0.04
SRPXP78539 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SRPXP78539 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRPXP78539 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRPXP78539 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SRPXP78539 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.32■□□□□ 0.04
SRPXP78539 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.32■□□□□ 0.04
SRPXP78539 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SRPXP78539 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
SRPXP78539 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.32■□□□□ 0.04
SRPXP78539 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.32■□□□□ 0.04
SRPXP78539 AC105036.2-201ENST00000569468 176 ntBASIC15.32■□□□□ 0.04
SRPXP78539 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.32■□□□□ 0.04
SRPXP78539 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.32■□□□□ 0.04
SRPXP78539 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.32■□□□□ 0.04
SRPXP78539 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.32■□□□□ 0.04
SRPXP78539 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
SRPXP78539 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SRPXP78539 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SRPXP78539 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRPXP78539 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRPXP78539 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SRPXP78539 AL499627.1-201ENST00000569373 2188 ntBASIC15.32■□□□□ 0.04
SRPXP78539 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRPXP78539 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SRPXP78539 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SRPXP78539 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SRPXP78539 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
SRPXP78539 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRPXP78539 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SRPXP78539 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRPXP78539 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRPXP78539 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.32■□□□□ 0.04
SRPXP78539 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRPXP78539 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SRPXP78539 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRPXP78539 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRPXP78539 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
SRPXP78539 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRPXP78539 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRPXP78539 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SRPXP78539 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SRPXP78539 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRPXP78539 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRPXP78539 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SRPXP78539 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.31■□□□□ 0.04
SRPXP78539 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRPXP78539 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.31■□□□□ 0.04
SRPXP78539 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SRPXP78539 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
SRPXP78539 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.31■□□□□ 0.04
SRPXP78539 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.31■□□□□ 0.04
SRPXP78539 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.31■□□□□ 0.04
SRPXP78539 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC15.31■□□□□ 0.04
SRPXP78539 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.31■□□□□ 0.04
SRPXP78539 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.31■□□□□ 0.04
SRPXP78539 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.31■□□□□ 0.04
SRPXP78539 MARS-234ENST00000630571 216 ntTSL 5 BASIC15.31■□□□□ 0.04
SRPXP78539 MARS-235ENST00000630803 183 ntTSL 3 BASIC15.31■□□□□ 0.04
SRPXP78539 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRPXP78539 KRT8P32-201ENST00000512863 1461 ntBASIC15.31■□□□□ 0.04
SRPXP78539 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRPXP78539 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.31■□□□□ 0.04
SRPXP78539 AC092368.3-202ENST00000574180 1591 ntBASIC15.31■□□□□ 0.04
SRPXP78539 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SRPXP78539 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.31■□□□□ 0.04
SRPXP78539 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SRPXP78539 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SRPXP78539 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRPXP78539 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRPXP78539 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRPXP78539 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRPXP78539 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRPXP78539 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SRPXP78539 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRPXP78539 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRPXP78539 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRPXP78539 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
SRPXP78539 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRPXP78539 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SRPXP78539 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SRPXP78539 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms