Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN6P56747 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.83■□□□□ 0.44
CLDN6P56747 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN6P56747 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN6P56747 Z69720.1-201ENST00000601483 472 ntBASIC17.83■□□□□ 0.44
CLDN6P56747 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.83■□□□□ 0.44
CLDN6P56747 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN6P56747 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.83■□□□□ 0.44
CLDN6P56747 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CLDN6P56747 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN6P56747 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CLDN6P56747 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
CLDN6P56747 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLDN6P56747 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN6P56747 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN6P56747 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CLDN6P56747 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN6P56747 Z82202.1-201ENST00000623446 1880 ntBASIC17.82■□□□□ 0.44
CLDN6P56747 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN6P56747 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN6P56747 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN6P56747 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN6P56747 IL9RP2-201ENST00000423948 1312 ntBASIC17.82■□□□□ 0.44
CLDN6P56747 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN6P56747 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN6P56747 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN6P56747 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN6P56747 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN6P56747 MIR574-201ENST00000385209 96 ntBASIC17.82■□□□□ 0.44
CLDN6P56747 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN6P56747 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.82■□□□□ 0.44
CLDN6P56747 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN6P56747 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN6P56747 RNA5SP419-201ENST00000515908 135 ntBASIC17.82■□□□□ 0.44
CLDN6P56747 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.82■□□□□ 0.44
CLDN6P56747 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CLDN6P56747 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.82■□□□□ 0.44
CLDN6P56747 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN6P56747 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CLDN6P56747 AC148477.8-201ENST00000624298 468 ntBASIC17.82■□□□□ 0.44
CLDN6P56747 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.82■□□□□ 0.44
CLDN6P56747 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN6P56747 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN6P56747 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN6P56747 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.82■□□□□ 0.44
CLDN6P56747 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CLDN6P56747 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN6P56747 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN6P56747 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.81■□□□□ 0.44
CLDN6P56747 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN6P56747 AL109659.2-201ENST00000606809 1674 ntBASIC17.81■□□□□ 0.44
CLDN6P56747 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.81■□□□□ 0.44
CLDN6P56747 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN6P56747 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN6P56747 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN6P56747 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN6P56747 KRT18P13-201ENST00000400056 1290 ntBASIC17.81■□□□□ 0.44
CLDN6P56747 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CLDN6P56747 SAPCD2P3-201ENST00000455031 850 ntBASIC17.81■□□□□ 0.44
CLDN6P56747 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.81■□□□□ 0.44
CLDN6P56747 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.81■□□□□ 0.44
CLDN6P56747 GPR32P1-201ENST00000601788 811 ntBASIC17.81■□□□□ 0.44
CLDN6P56747 REXO1L6P-202ENST00000619970 1078 ntBASIC17.81■□□□□ 0.44
CLDN6P56747 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN6P56747 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN6P56747 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN6P56747 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN6P56747 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.81■□□□□ 0.44
CLDN6P56747 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN6P56747 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN6P56747 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN6P56747 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.81■□□□□ 0.44
CLDN6P56747 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN6P56747 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.81■□□□□ 0.44
CLDN6P56747 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN6P56747 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
CLDN6P56747 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CLDN6P56747 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN6P56747 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CLDN6P56747 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN6P56747 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN6P56747 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN6P56747 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CLDN6P56747 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN6P56747 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.8■□□□□ 0.44
CLDN6P56747 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.8■□□□□ 0.44
CLDN6P56747 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN6P56747 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.8■□□□□ 0.44
CLDN6P56747 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.8■□□□□ 0.44
CLDN6P56747 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.8■□□□□ 0.44
CLDN6P56747 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN6P56747 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN6P56747 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN6P56747 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN6P56747 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
CLDN6P56747 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN6P56747 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN6P56747 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN6P56747 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN6P56747 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms