Protein–RNA interactions for Protein: P55774

CCL18, C-C motif chemokine 18, humanhuman

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL18P55774 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL18P55774 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL18P55774 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
CCL18P55774 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL18P55774 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL18P55774 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL18P55774 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL18P55774 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL18P55774 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL18P55774 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL18P55774 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CCL18P55774 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC13.13□□□□□ -0.31
CCL18P55774 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL18P55774 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL18P55774 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL18P55774 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL18P55774 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL18P55774 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
CCL18P55774 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL18P55774 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL18P55774 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL18P55774 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CCL18P55774 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
CCL18P55774 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.12□□□□□ -0.31
CCL18P55774 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.12□□□□□ -0.31
CCL18P55774 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
CCL18P55774 AC010203.1-204ENST00000548782 407 ntBASIC13.12□□□□□ -0.31
CCL18P55774 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC13.12□□□□□ -0.31
CCL18P55774 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL18P55774 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL18P55774 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL18P55774 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL18P55774 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CCL18P55774 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL18P55774 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL18P55774 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL18P55774 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL18P55774 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CCL18P55774 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL18P55774 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL18P55774 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL18P55774 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC13.12□□□□□ -0.31
CCL18P55774 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL18P55774 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL18P55774 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC13.12□□□□□ -0.31
CCL18P55774 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL18P55774 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
CCL18P55774 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CCL18P55774 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL18P55774 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL18P55774 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CCL18P55774 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL18P55774 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL18P55774 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CCL18P55774 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL18P55774 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL18P55774 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL18P55774 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL18P55774 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL18P55774 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL18P55774 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL18P55774 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL18P55774 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL18P55774 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL18P55774 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL18P55774 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL18P55774 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL18P55774 AP003041.3-201ENST00000527151 707 ntBASIC13.11□□□□□ -0.31
CCL18P55774 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL18P55774 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.11□□□□□ -0.31
CCL18P55774 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL18P55774 AC140113.3-201ENST00000605663 199 ntBASIC13.11□□□□□ -0.31
CCL18P55774 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CCL18P55774 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL18P55774 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CCL18P55774 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL18P55774 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL18P55774 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL18P55774 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CCL18P55774 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL18P55774 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL18P55774 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL18P55774 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL18P55774 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL18P55774 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL18P55774 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL18P55774 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL18P55774 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL18P55774 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CCL18P55774 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL18P55774 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL18P55774 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL18P55774 AC005082.1-201ENST00000413042 2259 ntBASIC13.1□□□□□ -0.31
CCL18P55774 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL18P55774 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL18P55774 SDHAP1-207ENST00000440850 2000 ntBASIC13.1□□□□□ -0.31
CCL18P55774 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL18P55774 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL18P55774 AL032819.2-201ENST00000624543 2162 ntBASIC13.1□□□□□ -0.31
CCL18P55774 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms