Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKN2DP55273 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDKN2DP55273 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKN2DP55273 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CDKN2DP55273 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKN2DP55273 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.38■□□□□ 0.53
CDKN2DP55273 AL162741.1-201ENST00000565563 1558 ntBASIC18.38■□□□□ 0.53
CDKN2DP55273 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDKN2DP55273 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDKN2DP55273 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.37■□□□□ 0.53
CDKN2DP55273 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CDKN2DP55273 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDKN2DP55273 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.37■□□□□ 0.53
CDKN2DP55273 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.37■□□□□ 0.53
CDKN2DP55273 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.37■□□□□ 0.53
CDKN2DP55273 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDKN2DP55273 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDKN2DP55273 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDKN2DP55273 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDKN2DP55273 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDKN2DP55273 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDKN2DP55273 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.37■□□□□ 0.53
CDKN2DP55273 SNORA78-201ENST00000459373 127 ntBASIC18.37■□□□□ 0.53
CDKN2DP55273 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDKN2DP55273 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.37■□□□□ 0.53
CDKN2DP55273 MIR4785-201ENST00000585005 73 ntBASIC18.37■□□□□ 0.53
CDKN2DP55273 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.37■□□□□ 0.53
CDKN2DP55273 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDKN2DP55273 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.37■□□□□ 0.53
CDKN2DP55273 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
CDKN2DP55273 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.37■□□□□ 0.53
CDKN2DP55273 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.37■□□□□ 0.53
CDKN2DP55273 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDKN2DP55273 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDKN2DP55273 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDKN2DP55273 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDKN2DP55273 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDKN2DP55273 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CDKN2DP55273 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDKN2DP55273 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.36■□□□□ 0.53
CDKN2DP55273 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDKN2DP55273 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CDKN2DP55273 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.36■□□□□ 0.53
CDKN2DP55273 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CDKN2DP55273 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.36■□□□□ 0.53
CDKN2DP55273 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.36■□□□□ 0.53
CDKN2DP55273 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.36■□□□□ 0.53
CDKN2DP55273 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.36■□□□□ 0.53
CDKN2DP55273 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDKN2DP55273 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.36■□□□□ 0.53
CDKN2DP55273 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDKN2DP55273 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.36■□□□□ 0.53
CDKN2DP55273 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.36■□□□□ 0.53
CDKN2DP55273 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDKN2DP55273 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.36■□□□□ 0.53
CDKN2DP55273 AL133373.2-201ENST00000623187 2828 ntBASIC18.36■□□□□ 0.53
CDKN2DP55273 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKN2DP55273 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CDKN2DP55273 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKN2DP55273 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKN2DP55273 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.35■□□□□ 0.53
CDKN2DP55273 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDKN2DP55273 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.35■□□□□ 0.53
CDKN2DP55273 AC036111.1-201ENST00000533973 1582 ntBASIC18.35■□□□□ 0.53
CDKN2DP55273 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKN2DP55273 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDKN2DP55273 KRT8P50-201ENST00000562022 1438 ntBASIC18.35■□□□□ 0.53
CDKN2DP55273 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKN2DP55273 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKN2DP55273 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKN2DP55273 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDKN2DP55273 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKN2DP55273 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDKN2DP55273 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.35■□□□□ 0.53
CDKN2DP55273 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CDKN2DP55273 AL355075.4-201ENST00000554988 638 ntBASIC18.35■□□□□ 0.53
CDKN2DP55273 MIR3180-5-201ENST00000583743 153 ntBASIC18.35■□□□□ 0.53
CDKN2DP55273 AC099343.3-201ENST00000605834 2503 ntBASIC18.35■□□□□ 0.53
CDKN2DP55273 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDKN2DP55273 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CDKN2DP55273 ESPNP-201ENST00000270691 2015 ntBASIC18.35■□□□□ 0.53
CDKN2DP55273 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDKN2DP55273 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKN2DP55273 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDKN2DP55273 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDKN2DP55273 AC034236.2-201ENST00000606662 1610 ntBASIC18.34■□□□□ 0.53
CDKN2DP55273 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CDKN2DP55273 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CDKN2DP55273 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKN2DP55273 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.34■□□□□ 0.53
CDKN2DP55273 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKN2DP55273 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDKN2DP55273 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKN2DP55273 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CDKN2DP55273 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKN2DP55273 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKN2DP55273 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.34■□□□□ 0.53
CDKN2DP55273 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.34■□□□□ 0.53
CDKN2DP55273 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.34■□□□□ 0.53
CDKN2DP55273 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms