Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC9A3P48764 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC9A3P48764 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC9A3P48764 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SLC9A3P48764 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC9A3P48764 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC9A3P48764 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
SLC9A3P48764 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC9A3P48764 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC9A3P48764 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC9A3P48764 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC9A3P48764 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC9A3P48764 AL353807.1-201ENST00000427475 662 ntBASIC17.05■□□□□ 0.32
SLC9A3P48764 AC004980.1-204ENST00000429707 299 ntBASIC17.05■□□□□ 0.32
SLC9A3P48764 AP002982.1-201ENST00000492365 877 ntBASIC17.05■□□□□ 0.32
SLC9A3P48764 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SLC9A3P48764 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC9A3P48764 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC9A3P48764 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC9A3P48764 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC9A3P48764 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC9A3P48764 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC9A3P48764 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC9A3P48764 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC9A3P48764 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SLC9A3P48764 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC9A3P48764 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
SLC9A3P48764 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC9A3P48764 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC9A3P48764 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC9A3P48764 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC9A3P48764 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC9A3P48764 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SLC9A3P48764 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC9A3P48764 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC9A3P48764 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC9A3P48764 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC9A3P48764 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SLC9A3P48764 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC9A3P48764 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC9A3P48764 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC9A3P48764 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC9A3P48764 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC9A3P48764 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC9A3P48764 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC9A3P48764 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC9A3P48764 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.04■□□□□ 0.32
SLC9A3P48764 KSR1P1-201ENST00000446298 240 ntBASIC17.04■□□□□ 0.32
SLC9A3P48764 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.04■□□□□ 0.32
SLC9A3P48764 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC9A3P48764 AC073648.6-201ENST00000641589 218 ntBASIC17.04■□□□□ 0.32
SLC9A3P48764 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC9A3P48764 AC073592.3-201ENST00000625118 1834 ntBASIC17.04■□□□□ 0.32
SLC9A3P48764 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SLC9A3P48764 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC9A3P48764 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC9A3P48764 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC9A3P48764 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SLC9A3P48764 KRT8P3-201ENST00000519669 1449 ntBASIC17.04■□□□□ 0.32
SLC9A3P48764 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC9A3P48764 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
SLC9A3P48764 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.03■□□□□ 0.32
SLC9A3P48764 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SLC9A3P48764 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC9A3P48764 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC9A3P48764 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC9A3P48764 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC9A3P48764 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC9A3P48764 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC9A3P48764 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC9A3P48764 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC9A3P48764 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC9A3P48764 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.03■□□□□ 0.32
SLC9A3P48764 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC9A3P48764 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SLC9A3P48764 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC9A3P48764 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC9A3P48764 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SLC9A3P48764 AC006058.3-201ENST00000606217 1069 ntBASIC17.03■□□□□ 0.32
SLC9A3P48764 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SLC9A3P48764 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC9A3P48764 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC9A3P48764 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SLC9A3P48764 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC9A3P48764 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC9A3P48764 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC9A3P48764 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC9A3P48764 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.03■□□□□ 0.32
SLC9A3P48764 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
SLC9A3P48764 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.03■□□□□ 0.32
SLC9A3P48764 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC9A3P48764 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.02■□□□□ 0.32
SLC9A3P48764 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC9A3P48764 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SLC9A3P48764 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SLC9A3P48764 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC9A3P48764 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SLC9A3P48764 HTR7P1-201ENST00000538670 1336 ntBASIC17.02■□□□□ 0.32
SLC9A3P48764 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SLC9A3P48764 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms