Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.6■□□□□ 0.41
GABRA4P48169 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GABRA4P48169 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GABRA4P48169 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.6■□□□□ 0.41
GABRA4P48169 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GABRA4P48169 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
GABRA4P48169 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.6■□□□□ 0.41
GABRA4P48169 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.6■□□□□ 0.41
GABRA4P48169 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GABRA4P48169 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GABRA4P48169 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.6■□□□□ 0.41
GABRA4P48169 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GABRA4P48169 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
GABRA4P48169 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GABRA4P48169 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GABRA4P48169 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GABRA4P48169 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GABRA4P48169 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GABRA4P48169 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
GABRA4P48169 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
GABRA4P48169 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
GABRA4P48169 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GABRA4P48169 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GABRA4P48169 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GABRA4P48169 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GABRA4P48169 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GABRA4P48169 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GABRA4P48169 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GABRA4P48169 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GABRA4P48169 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.59■□□□□ 0.41
GABRA4P48169 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
GABRA4P48169 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.59■□□□□ 0.41
GABRA4P48169 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.59■□□□□ 0.41
GABRA4P48169 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.59■□□□□ 0.41
GABRA4P48169 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.59■□□□□ 0.41
GABRA4P48169 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GABRA4P48169 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.59■□□□□ 0.41
GABRA4P48169 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.59■□□□□ 0.41
GABRA4P48169 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.59■□□□□ 0.41
GABRA4P48169 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.59■□□□□ 0.41
GABRA4P48169 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.59■□□□□ 0.41
GABRA4P48169 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GABRA4P48169 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.59■□□□□ 0.41
GABRA4P48169 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.59■□□□□ 0.41
GABRA4P48169 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
GABRA4P48169 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
GABRA4P48169 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GABRA4P48169 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.58■□□□□ 0.41
GABRA4P48169 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.58■□□□□ 0.41
GABRA4P48169 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.58■□□□□ 0.41
GABRA4P48169 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.58■□□□□ 0.41
GABRA4P48169 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
GABRA4P48169 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GABRA4P48169 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.58■□□□□ 0.4
GABRA4P48169 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GABRA4P48169 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GABRA4P48169 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GABRA4P48169 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GABRA4P48169 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GABRA4P48169 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.58■□□□□ 0.4
GABRA4P48169 RNF126P1-202ENST00000569893 925 ntBASIC17.58■□□□□ 0.4
GABRA4P48169 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.58■□□□□ 0.4
GABRA4P48169 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
GABRA4P48169 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GABRA4P48169 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.58■□□□□ 0.4
GABRA4P48169 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GABRA4P48169 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.58■□□□□ 0.4
GABRA4P48169 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GABRA4P48169 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
GABRA4P48169 AL499627.1-201ENST00000569373 2188 ntBASIC17.57■□□□□ 0.4
GABRA4P48169 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GABRA4P48169 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GABRA4P48169 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GABRA4P48169 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.57■□□□□ 0.4
GABRA4P48169 AC112777.1-201ENST00000540175 1423 ntBASIC17.57■□□□□ 0.4
GABRA4P48169 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GABRA4P48169 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GABRA4P48169 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GABRA4P48169 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GABRA4P48169 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GABRA4P48169 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.57■□□□□ 0.4
GABRA4P48169 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.57■□□□□ 0.4
GABRA4P48169 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.57■□□□□ 0.4
GABRA4P48169 AC009065.1-201ENST00000564055 1225 ntBASIC17.57■□□□□ 0.4
GABRA4P48169 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.57■□□□□ 0.4
GABRA4P48169 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.57■□□□□ 0.4
GABRA4P48169 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.57■□□□□ 0.4
GABRA4P48169 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.57■□□□□ 0.4
GABRA4P48169 AC011498.5-201ENST00000592027 486 ntBASIC17.57■□□□□ 0.4
GABRA4P48169 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.57■□□□□ 0.4
GABRA4P48169 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GABRA4P48169 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GABRA4P48169 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
GABRA4P48169 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GABRA4P48169 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.56■□□□□ 0.4
GABRA4P48169 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GABRA4P48169 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABRA4P48169 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.56■□□□□ 0.4
GABRA4P48169 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABRA4P48169 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms