Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.75■□□□□ 0.75
BRCC3P46736 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
BRCC3P46736 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRCC3P46736 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRCC3P46736 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.75■□□□□ 0.75
BRCC3P46736 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRCC3P46736 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRCC3P46736 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BRCC3P46736 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRCC3P46736 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.75■□□□□ 0.75
BRCC3P46736 AP003733.1-201ENST00000491725 852 ntBASIC19.75■□□□□ 0.75
BRCC3P46736 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.75■□□□□ 0.75
BRCC3P46736 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.75■□□□□ 0.75
BRCC3P46736 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.75■□□□□ 0.75
BRCC3P46736 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.75■□□□□ 0.75
BRCC3P46736 AP002414.4-201ENST00000589764 1148 ntBASIC19.75■□□□□ 0.75
BRCC3P46736 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRCC3P46736 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.75■□□□□ 0.75
BRCC3P46736 Z83836.1-201ENST00000624605 1642 ntBASIC19.75■□□□□ 0.75
BRCC3P46736 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.75■□□□□ 0.75
BRCC3P46736 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRCC3P46736 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BRCC3P46736 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRCC3P46736 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRCC3P46736 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRCC3P46736 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRCC3P46736 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRCC3P46736 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.75■□□□□ 0.75
BRCC3P46736 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRCC3P46736 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.75■□□□□ 0.75
BRCC3P46736 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.74■□□□□ 0.75
BRCC3P46736 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.74■□□□□ 0.75
BRCC3P46736 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRCC3P46736 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
BRCC3P46736 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRCC3P46736 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.74■□□□□ 0.75
BRCC3P46736 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.74■□□□□ 0.75
BRCC3P46736 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRCC3P46736 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRCC3P46736 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRCC3P46736 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BRCC3P46736 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.74■□□□□ 0.75
BRCC3P46736 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.74■□□□□ 0.75
BRCC3P46736 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.74■□□□□ 0.75
BRCC3P46736 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BRCC3P46736 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.74■□□□□ 0.75
BRCC3P46736 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.74■□□□□ 0.75
BRCC3P46736 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.74■□□□□ 0.75
BRCC3P46736 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.74■□□□□ 0.75
BRCC3P46736 AC005332.3-201ENST00000589904 676 ntBASIC19.74■□□□□ 0.75
BRCC3P46736 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BRCC3P46736 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
BRCC3P46736 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRCC3P46736 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRCC3P46736 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
BRCC3P46736 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BRCC3P46736 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRCC3P46736 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRCC3P46736 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.73■□□□□ 0.75
BRCC3P46736 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BRCC3P46736 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BRCC3P46736 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.73■□□□□ 0.75
BRCC3P46736 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
BRCC3P46736 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRCC3P46736 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
BRCC3P46736 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
BRCC3P46736 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BRCC3P46736 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRCC3P46736 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRCC3P46736 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BRCC3P46736 CHCHD2P8-201ENST00000429873 447 ntBASIC19.73■□□□□ 0.75
BRCC3P46736 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BRCC3P46736 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRCC3P46736 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
BRCC3P46736 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
BRCC3P46736 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.73■□□□□ 0.75
BRCC3P46736 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.73■□□□□ 0.75
BRCC3P46736 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRCC3P46736 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
BRCC3P46736 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BRCC3P46736 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.73■□□□□ 0.75
BRCC3P46736 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRCC3P46736 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRCC3P46736 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BRCC3P46736 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.73■□□□□ 0.75
BRCC3P46736 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRCC3P46736 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BRCC3P46736 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRCC3P46736 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRCC3P46736 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.72■□□□□ 0.75
BRCC3P46736 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
BRCC3P46736 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.72■□□□□ 0.75
BRCC3P46736 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.72■□□□□ 0.75
BRCC3P46736 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRCC3P46736 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRCC3P46736 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRCC3P46736 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.72■□□□□ 0.75
BRCC3P46736 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.72■□□□□ 0.75
BRCC3P46736 KRT18P41-201ENST00000518924 1277 ntBASIC19.72■□□□□ 0.75
BRCC3P46736 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms