Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
ATRXP46100 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATRXP46100 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATRXP46100 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATRXP46100 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.92■□□□□ 0.3
ATRXP46100 MIR5100-201ENST00000579544 119 ntBASIC16.92■□□□□ 0.3
ATRXP46100 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.92■□□□□ 0.3
ATRXP46100 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.92■□□□□ 0.3
ATRXP46100 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATRXP46100 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATRXP46100 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.92■□□□□ 0.3
ATRXP46100 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATRXP46100 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATRXP46100 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATRXP46100 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATRXP46100 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATRXP46100 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATRXP46100 AP003733.1-201ENST00000491725 852 ntBASIC16.92■□□□□ 0.3
ATRXP46100 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.92■□□□□ 0.3
ATRXP46100 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATRXP46100 AC073592.5-201ENST00000624854 528 ntBASIC16.92■□□□□ 0.3
ATRXP46100 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATRXP46100 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATRXP46100 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATRXP46100 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATRXP46100 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.92■□□□□ 0.3
ATRXP46100 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.92■□□□□ 0.3
ATRXP46100 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.92■□□□□ 0.3
ATRXP46100 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATRXP46100 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATRXP46100 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATRXP46100 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ATRXP46100 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.91■□□□□ 0.3
ATRXP46100 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.91■□□□□ 0.3
ATRXP46100 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATRXP46100 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.91■□□□□ 0.3
ATRXP46100 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.91■□□□□ 0.3
ATRXP46100 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.91■□□□□ 0.3
ATRXP46100 IGHV3-41-201ENST00000613121 348 ntBASIC16.91■□□□□ 0.3
ATRXP46100 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ATRXP46100 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC16.91■□□□□ 0.3
ATRXP46100 ZNF815P-204ENST00000434898 1737 ntBASIC16.91■□□□□ 0.3
ATRXP46100 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATRXP46100 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ATRXP46100 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ATRXP46100 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATRXP46100 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATRXP46100 POM121L3P-201ENST00000419331 1163 ntBASIC16.91■□□□□ 0.3
ATRXP46100 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.91■□□□□ 0.3
ATRXP46100 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.91■□□□□ 0.3
ATRXP46100 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.91■□□□□ 0.3
ATRXP46100 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATRXP46100 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ATRXP46100 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ATRXP46100 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ATRXP46100 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATRXP46100 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATRXP46100 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATRXP46100 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.9■□□□□ 0.3
ATRXP46100 RPS2P28-201ENST00000314255 741 ntBASIC16.9■□□□□ 0.3
ATRXP46100 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATRXP46100 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATRXP46100 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.9■□□□□ 0.3
ATRXP46100 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
ATRXP46100 RBM17P3-201ENST00000417687 1192 ntBASIC16.9■□□□□ 0.3
ATRXP46100 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.9■□□□□ 0.3
ATRXP46100 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.9■□□□□ 0.3
ATRXP46100 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.9■□□□□ 0.3
ATRXP46100 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.9■□□□□ 0.3
ATRXP46100 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
ATRXP46100 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.9■□□□□ 0.3
ATRXP46100 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATRXP46100 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
ATRXP46100 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATRXP46100 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATRXP46100 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
ATRXP46100 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
ATRXP46100 AC007967.2-201ENST00000432613 625 ntBASIC16.9■□□□□ 0.3
ATRXP46100 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.9■□□□□ 0.3
ATRXP46100 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.9■□□□□ 0.3
ATRXP46100 ALG1L5P-201ENST00000482043 771 ntBASIC16.9■□□□□ 0.3
ATRXP46100 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.9■□□□□ 0.3
ATRXP46100 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATRXP46100 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATRXP46100 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATRXP46100 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.9■□□□□ 0.3
ATRXP46100 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATRXP46100 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATRXP46100 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.3
ATRXP46100 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ATRXP46100 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.89■□□□□ 0.3
ATRXP46100 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATRXP46100 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.89■□□□□ 0.29
ATRXP46100 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATRXP46100 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.89■□□□□ 0.29
ATRXP46100 AC024563.2-201ENST00000603282 481 ntBASIC16.89■□□□□ 0.29
ATRXP46100 AP001269.4-201ENST00000609611 512 ntBASIC16.89■□□□□ 0.29
ATRXP46100 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ATRXP46100 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATRXP46100 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms