Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MDH1P40925 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.68■□□□□ 0.58
MDH1P40925 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
MDH1P40925 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.68■□□□□ 0.58
MDH1P40925 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.68■□□□□ 0.58
MDH1P40925 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MDH1P40925 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MDH1P40925 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
MDH1P40925 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MDH1P40925 LINC00602-201ENST00000629776 2065 ntBASIC18.68■□□□□ 0.58
MDH1P40925 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MDH1P40925 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.68■□□□□ 0.58
MDH1P40925 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MDH1P40925 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MDH1P40925 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.68■□□□□ 0.58
MDH1P40925 AP006587.1-201ENST00000534129 1502 ntBASIC18.68■□□□□ 0.58
MDH1P40925 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MDH1P40925 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MDH1P40925 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MDH1P40925 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MDH1P40925 AC006116.8-202ENST00000587620 1550 ntBASIC18.68■□□□□ 0.58
MDH1P40925 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
MDH1P40925 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MDH1P40925 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MDH1P40925 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MDH1P40925 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MDH1P40925 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
MDH1P40925 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MDH1P40925 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
MDH1P40925 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MDH1P40925 TSPY23P-201ENST00000440136 739 ntBASIC18.67■□□□□ 0.58
MDH1P40925 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.67■□□□□ 0.58
MDH1P40925 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
MDH1P40925 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.67■□□□□ 0.58
MDH1P40925 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MDH1P40925 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.67■□□□□ 0.58
MDH1P40925 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
MDH1P40925 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MDH1P40925 AL121761.2-201ENST00000598007 1648 ntBASIC18.67■□□□□ 0.58
MDH1P40925 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MDH1P40925 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
MDH1P40925 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MDH1P40925 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MDH1P40925 KRT8P45-201ENST00000414328 1447 ntBASIC18.66■□□□□ 0.58
MDH1P40925 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MDH1P40925 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.66■□□□□ 0.58
MDH1P40925 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MDH1P40925 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MDH1P40925 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MDH1P40925 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MDH1P40925 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MDH1P40925 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.66■□□□□ 0.58
MDH1P40925 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
MDH1P40925 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MDH1P40925 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.66■□□□□ 0.58
MDH1P40925 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.66■□□□□ 0.58
MDH1P40925 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
MDH1P40925 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MDH1P40925 GPX1P1-201ENST00000388829 606 ntBASIC18.66■□□□□ 0.58
MDH1P40925 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.66■□□□□ 0.58
MDH1P40925 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MDH1P40925 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.66■□□□□ 0.58
MDH1P40925 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.66■□□□□ 0.58
MDH1P40925 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MDH1P40925 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.66■□□□□ 0.58
MDH1P40925 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MDH1P40925 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MDH1P40925 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MDH1P40925 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
MDH1P40925 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
MDH1P40925 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
MDH1P40925 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MDH1P40925 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MDH1P40925 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.66■□□□□ 0.58
MDH1P40925 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MDH1P40925 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MDH1P40925 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.66■□□□□ 0.58
MDH1P40925 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MDH1P40925 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MDH1P40925 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MDH1P40925 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.65■□□□□ 0.58
MDH1P40925 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
MDH1P40925 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.65■□□□□ 0.58
MDH1P40925 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MDH1P40925 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MDH1P40925 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MDH1P40925 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.65■□□□□ 0.58
MDH1P40925 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
MDH1P40925 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
MDH1P40925 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
MDH1P40925 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
MDH1P40925 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MDH1P40925 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.65■□□□□ 0.58
MDH1P40925 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.65■□□□□ 0.58
MDH1P40925 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
MDH1P40925 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MDH1P40925 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MDH1P40925 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.65■□□□□ 0.58
MDH1P40925 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.65■□□□□ 0.58
MDH1P40925 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms