Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 AC113410.3-201ENST00000623366 203 ntBASIC17.67■□□□□ 0.42
GPC1P35052 AL049637.2-201ENST00000641778 930 ntBASIC17.67■□□□□ 0.42
GPC1P35052 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.67■□□□□ 0.42
GPC1P35052 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
GPC1P35052 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC1P35052 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GPC1P35052 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.67■□□□□ 0.42
GPC1P35052 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.67■□□□□ 0.42
GPC1P35052 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
GPC1P35052 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
GPC1P35052 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC1P35052 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC1P35052 AC090164.3-201ENST00000610780 2143 ntBASIC17.66■□□□□ 0.42
GPC1P35052 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC1P35052 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC1P35052 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GPC1P35052 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.66■□□□□ 0.42
GPC1P35052 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
GPC1P35052 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
GPC1P35052 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
GPC1P35052 MESTP1-201ENST00000404287 994 ntBASIC17.66■□□□□ 0.42
GPC1P35052 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.66■□□□□ 0.42
GPC1P35052 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.66■□□□□ 0.42
GPC1P35052 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.66■□□□□ 0.42
GPC1P35052 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.66■□□□□ 0.42
GPC1P35052 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.66■□□□□ 0.42
GPC1P35052 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.66■□□□□ 0.42
GPC1P35052 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.66■□□□□ 0.42
GPC1P35052 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC1P35052 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.66■□□□□ 0.42
GPC1P35052 DGCR10-201ENST00000609839 495 ntBASIC17.66■□□□□ 0.42
GPC1P35052 AC068587.9-201ENST00000641814 219 ntBASIC17.66■□□□□ 0.42
GPC1P35052 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC1P35052 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.66■□□□□ 0.42
GPC1P35052 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC1P35052 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
GPC1P35052 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC1P35052 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC1P35052 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GPC1P35052 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
GPC1P35052 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GPC1P35052 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
GPC1P35052 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC1P35052 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC1P35052 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC1P35052 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC1P35052 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.65■□□□□ 0.42
GPC1P35052 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.65■□□□□ 0.42
GPC1P35052 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.65■□□□□ 0.42
GPC1P35052 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.65■□□□□ 0.42
GPC1P35052 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.65■□□□□ 0.42
GPC1P35052 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC1P35052 KRT8P32-201ENST00000512863 1461 ntBASIC17.65■□□□□ 0.42
GPC1P35052 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC1P35052 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.65■□□□□ 0.42
GPC1P35052 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GPC1P35052 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.65■□□□□ 0.42
GPC1P35052 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.65■□□□□ 0.42
GPC1P35052 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.65■□□□□ 0.42
GPC1P35052 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GPC1P35052 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
GPC1P35052 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC1P35052 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC1P35052 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC1P35052 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.65■□□□□ 0.42
GPC1P35052 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
GPC1P35052 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
GPC1P35052 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.65■□□□□ 0.42
GPC1P35052 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.65■□□□□ 0.42
GPC1P35052 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC1P35052 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC1P35052 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.65■□□□□ 0.42
GPC1P35052 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
GPC1P35052 AC009113.1-201ENST00000570267 2443 ntBASIC17.64■□□□□ 0.42
GPC1P35052 AC005332.8-201ENST00000622750 2735 ntBASIC17.64■□□□□ 0.42
GPC1P35052 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC1P35052 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GPC1P35052 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.64■□□□□ 0.41
GPC1P35052 RCC2P3-201ENST00000418112 1537 ntBASIC17.64■□□□□ 0.41
GPC1P35052 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GPC1P35052 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.64■□□□□ 0.41
GPC1P35052 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC1P35052 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC1P35052 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.64■□□□□ 0.41
GPC1P35052 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
GPC1P35052 MIR718-201ENST00000390190 70 ntBASIC17.64■□□□□ 0.41
GPC1P35052 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.64■□□□□ 0.41
GPC1P35052 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC1P35052 MFAP1P1-201ENST00000442257 1255 ntBASIC17.64■□□□□ 0.41
GPC1P35052 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.64■□□□□ 0.41
GPC1P35052 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GPC1P35052 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.64■□□□□ 0.41
GPC1P35052 AC116562.2-201ENST00000507042 360 ntBASIC17.64■□□□□ 0.41
GPC1P35052 AC097488.1-201ENST00000507834 756 ntBASIC17.64■□□□□ 0.41
GPC1P35052 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
GPC1P35052 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.64■□□□□ 0.41
GPC1P35052 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.64■□□□□ 0.41
GPC1P35052 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.64■□□□□ 0.41
GPC1P35052 TMEM191A-211ENST00000637163 1067 ntBASIC17.64■□□□□ 0.41
GPC1P35052 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms