Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.39■□□□□ 0.37
CHMP24386 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CHMP24386 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP24386 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP24386 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP24386 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.39■□□□□ 0.37
CHMP24386 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.39■□□□□ 0.37
CHMP24386 AC083906.6-201ENST00000641366 219 ntBASIC17.39■□□□□ 0.37
CHMP24386 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.39■□□□□ 0.37
CHMP24386 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CHMP24386 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.39■□□□□ 0.37
CHMP24386 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP24386 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.39■□□□□ 0.37
CHMP24386 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP24386 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP24386 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.38■□□□□ 0.37
CHMP24386 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.38■□□□□ 0.37
CHMP24386 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP24386 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP24386 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP24386 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP24386 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP24386 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP24386 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CHMP24386 MIR1238-201ENST00000408483 83 ntBASIC17.38■□□□□ 0.37
CHMP24386 FAM207BP-201ENST00000447172 505 ntBASIC17.38■□□□□ 0.37
CHMP24386 AC091390.4-202ENST00000476426 537 ntBASIC17.38■□□□□ 0.37
CHMP24386 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP24386 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.38■□□□□ 0.37
CHMP24386 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP24386 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.38■□□□□ 0.37
CHMP24386 AP005242.2-201ENST00000580065 1175 ntBASIC17.38■□□□□ 0.37
CHMP24386 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.38■□□□□ 0.37
CHMP24386 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CHMP24386 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP24386 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.38■□□□□ 0.37
CHMP24386 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.38■□□□□ 0.37
CHMP24386 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP24386 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CHMP24386 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.38■□□□□ 0.37
CHMP24386 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.38■□□□□ 0.37
CHMP24386 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHMP24386 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CHMP24386 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP24386 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.37■□□□□ 0.37
CHMP24386 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.37■□□□□ 0.37
CHMP24386 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP24386 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP24386 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CHMP24386 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP24386 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP24386 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP24386 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.37■□□□□ 0.37
CHMP24386 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP24386 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP24386 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP24386 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CHMP24386 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.37■□□□□ 0.37
CHMP24386 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.37■□□□□ 0.37
CHMP24386 AC097488.1-201ENST00000507834 756 ntBASIC17.37■□□□□ 0.37
CHMP24386 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP24386 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.37■□□□□ 0.37
CHMP24386 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.37■□□□□ 0.37
CHMP24386 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.37■□□□□ 0.37
CHMP24386 AC133561.5-201ENST00000635547 218 ntBASIC17.37■□□□□ 0.37
CHMP24386 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CHMP24386 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP24386 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP24386 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP24386 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP24386 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CHMP24386 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP24386 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP24386 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.37■□□□□ 0.37
CHMP24386 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP24386 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP24386 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP24386 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP24386 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP24386 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHMP24386 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.36■□□□□ 0.37
CHMP24386 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CHMP24386 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.36■□□□□ 0.37
CHMP24386 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP24386 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.36■□□□□ 0.37
CHMP24386 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.36■□□□□ 0.37
CHMP24386 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP24386 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP24386 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP24386 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.36■□□□□ 0.37
CHMP24386 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.36■□□□□ 0.37
CHMP24386 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.36■□□□□ 0.37
CHMP24386 ECEL1P3-201ENST00000427961 737 ntBASIC17.36■□□□□ 0.37
CHMP24386 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP24386 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP24386 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
CHMP24386 AC097493.4-201ENST00000641197 219 ntBASIC17.36■□□□□ 0.37
CHMP24386 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CHMP24386 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.36■□□□□ 0.37
CHMP24386 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms