Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHRM3P20309 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHRM3P20309 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.52■□□□□ 0.55
CHRM3P20309 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.52■□□□□ 0.55
CHRM3P20309 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.51■□□□□ 0.55
CHRM3P20309 AL357033.4-201ENST00000617703 1807 ntBASIC18.51■□□□□ 0.55
CHRM3P20309 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CHRM3P20309 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.51■□□□□ 0.55
CHRM3P20309 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CHRM3P20309 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRM3P20309 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.51■□□□□ 0.55
CHRM3P20309 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.51■□□□□ 0.55
CHRM3P20309 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.51■□□□□ 0.55
CHRM3P20309 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRM3P20309 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRM3P20309 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRM3P20309 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CHRM3P20309 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.51■□□□□ 0.55
CHRM3P20309 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
CHRM3P20309 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRM3P20309 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRM3P20309 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRM3P20309 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.51■□□□□ 0.55
CHRM3P20309 AC079598.2-202ENST00000546624 1451 ntBASIC18.51■□□□□ 0.55
CHRM3P20309 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRM3P20309 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRM3P20309 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHRM3P20309 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.51■□□□□ 0.55
CHRM3P20309 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.5■□□□□ 0.55
CHRM3P20309 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRM3P20309 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CHRM3P20309 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRM3P20309 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHRM3P20309 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRM3P20309 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.5■□□□□ 0.55
CHRM3P20309 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRM3P20309 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHRM3P20309 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.5■□□□□ 0.55
CHRM3P20309 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRM3P20309 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CHRM3P20309 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.5■□□□□ 0.55
CHRM3P20309 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRM3P20309 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRM3P20309 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRM3P20309 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRM3P20309 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.5■□□□□ 0.55
CHRM3P20309 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.5■□□□□ 0.55
CHRM3P20309 AL355075.4-201ENST00000554988 638 ntBASIC18.5■□□□□ 0.55
CHRM3P20309 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.5■□□□□ 0.55
CHRM3P20309 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRM3P20309 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRM3P20309 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHRM3P20309 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRM3P20309 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRM3P20309 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHRM3P20309 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CHRM3P20309 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CHRM3P20309 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRM3P20309 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.5■□□□□ 0.55
CHRM3P20309 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRM3P20309 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHRM3P20309 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHRM3P20309 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRM3P20309 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHRM3P20309 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CHRM3P20309 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.49■□□□□ 0.55
CHRM3P20309 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRM3P20309 AC008556.1-201ENST00000610908 2040 ntBASIC18.49■□□□□ 0.55
CHRM3P20309 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.49■□□□□ 0.55
CHRM3P20309 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRM3P20309 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHRM3P20309 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRM3P20309 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.49■□□□□ 0.55
CHRM3P20309 MIR1238-201ENST00000408483 83 ntBASIC18.49■□□□□ 0.55
CHRM3P20309 AL390955.1-201ENST00000428694 934 ntBASIC18.49■□□□□ 0.55
CHRM3P20309 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHRM3P20309 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRM3P20309 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHRM3P20309 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.49■□□□□ 0.55
CHRM3P20309 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHRM3P20309 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHRM3P20309 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRM3P20309 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHRM3P20309 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRM3P20309 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRM3P20309 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.49■□□□□ 0.55
CHRM3P20309 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRM3P20309 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHRM3P20309 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRM3P20309 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.49■□□□□ 0.55
CHRM3P20309 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
CHRM3P20309 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRM3P20309 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRM3P20309 AL499627.1-201ENST00000569373 2188 ntBASIC18.48■□□□□ 0.55
CHRM3P20309 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRM3P20309 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CHRM3P20309 AL109659.2-201ENST00000606809 1674 ntBASIC18.48■□□□□ 0.55
CHRM3P20309 AC005332.8-201ENST00000622750 2735 ntBASIC18.48■□□□□ 0.55
CHRM3P20309 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRM3P20309 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms